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Os02g0634900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Proteasome subunit alpha type 2 (EC 3.4.25.1) (20S proteasome alpha subunit B) (20S proteasome subunit alpha-2).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.9 (0.0112) R2 : 0.521
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.565 (0.0269) R2dC : 0.465 R2C : 0.455
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.166 (0.0236) R2dN8 : 0.0667 R2N8 : 0.0566
σ : 0.212
deviance : 20.46
__
_____
C
peak time of C : 1.02
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
14.81 0.181 12.9 0.0171 0.546 0.0448 -0.0306 -1.03 0.119 0.988 20.5 861 -- --
16.92 0.192 12.9 0.169 0.558 0.202 -0.268 -- 0.143 0.839 21.3 3032 -- --
14.81 0.179 12.9 0.0172 0.546 0.0446 -- -1.03 0.119 0.995 20.5 859 -- --
16.89 0.191 12.9 0.116 0.539 0.283 -- -- 0.135 0.743 19.09 6960 -- --
33.01 0.268 12.9 -0.0683 -- 0.102 -- -1.17 0.1 -- 21 955 -- --
18.14 0.2 12.9 0.261 0.559 -- -0.302 -- 0.194 0.937 -- -- -- --
18.52 0.202 12.9 0.272 0.56 -- -- -- 0.196 0.996 -- -- -- --
34.62 0.274 12.9 -0.129 -- 0.595 -- -- 0.111 -- 14.3 29736 -- --
16.38 0.189 12.9 -- 0.531 0.458 -- -- 0.114 0.692 18.6 6937 -- --
38.04 0.288 12.9 0.293 -- -- -- -- 0.207 -- -- -- -- --
20.46 0.212 12.9 -- 0.565 -- -- -- 0.166 1.02 -- -- -- --
33.53 0.27 12.9 -- -- 0.564 -- -- 0.105 -- 18.31 2398 -- --
40.3 0.296 12.9 -- -- -- -- -- 0.174 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 14.64 temperature 20 1440 > th dose independent rect. 19 8
3 14.64 radiation 30 4320 < th dose independent rect. 16 16
4 14.65 temperature 20 1440 < th dose independent rect. 19 8
5 14.66 temperature 20 1440 > th dose independent rect. 20 6
8 14.66 temperature 20 1440 > th dose independent rect. 18 11
9 14.67 temperature 20 4320 < th dose independent rect. 21 1
14 14.67 temperature 20 720 < th dose independent rect. 12 19
15 14.67 humidity 90 14400 > th dose dependent rect. 13 16
16 14.68 humidity 90 14400 > th dose independent rect. 23 1
24 14.68 humidity 90 14400 > th dose dependent rect. 16 13
28 14.69 temperature 20 1440 < th dose independent rect. 21 4
32 14.69 humidity 90 14400 > th dose dependent rect. 23 11
39 14.70 humidity 90 14400 > th dose dependent rect. 24 14
51 14.71 humidity 90 14400 > th dose dependent sin 8 NA
56 14.71 humidity 90 14400 > th dose dependent rect. 18 10
66 14.72 temperature 20 4320 > th dose independent rect. 21 1
82 14.73 temperature 20 1440 > th dose independent sin 13 NA
88 14.73 temperature 20 1440 > th dose independent rect. 12 18
106 14.74 humidity 90 14400 > th dose dependent rect. 21 6
121 14.75 temperature 20 1440 < th dose independent sin 13 NA
143 14.75 temperature 15 720 > th dose dependent rect. 2 22
153 14.76 humidity 90 14400 > th dose dependent rect. 24 1
173 14.77 temperature 20 1440 < th dose independent rect. 15 15
176 14.77 humidity 90 14400 > th dose dependent rect. 22 4
250 14.81 humidity 90 14400 > th dose independent rect. 20 8
253 14.81 humidity 90 14400 > th dose independent rect. 18 11
271 14.81 temperature 10 720 > th dose dependent rect. 22 23
272 14.81 temperature 30 720 < th dose dependent rect. 12 23
317 14.83 temperature 10 720 > th dose dependent rect. 9 21
323 14.84 humidity 50 43200 > th dose independent rect. 8 1
341 14.84 temperature 30 720 < th dose dependent rect. 10 23
369 14.85 temperature 30 720 < th dose dependent rect. 19 23
382 14.86 temperature 10 720 > th dose dependent no NA NA
383 14.86 temperature 30 720 < th dose dependent no NA NA
384 14.86 radiation 10 4320 > th dose dependent rect. 5 3
408 14.86 temperature 30 720 < th dose dependent rect. 4 23
409 14.86 temperature 30 720 < th dose dependent rect. 6 23
425 14.87 temperature 15 720 > th dose dependent rect. 12 23
483 14.89 temperature 15 720 > th dose dependent rect. 16 23
515 14.90 temperature 30 720 < th dose dependent rect. 17 23
517 14.91 humidity 50 43200 < th dose independent rect. 8 1
522 14.91 humidity 50 43200 > th dose independent rect. 21 12
528 14.91 temperature 20 720 > th dose dependent rect. 22 17
541 14.91 temperature 15 720 > th dose dependent rect. 20 23
557 14.92 temperature 20 720 > th dose dependent sin 4 NA
580 14.92 temperature 30 720 < th dose dependent rect. 15 23
597 14.93 temperature 20 720 > th dose dependent rect. 20 19
614 14.94 wind 1 43200 > th dose independent rect. 2 1
619 14.94 radiation 30 43200 < th dose independent rect. 17 14
625 14.94 temperature 20 720 > th dose dependent rect. 1 14
672 14.95 radiation 1 14400 < th dose dependent rect. 24 8
696 14.96 humidity 90 14400 > th dose independent sin 11 NA
707 14.96 temperature 20 1440 > th dose dependent rect. 7 2
708 14.96 radiation 1 14400 < th dose dependent rect. 4 4
739 14.97 humidity 50 43200 > th dose independent rect. 2 7
742 14.97 humidity 50 43200 > th dose independent rect. 24 9
806 14.99 radiation 10 43200 < th dose independent rect. 18 3
818 14.99 radiation 30 4320 < th dose independent rect. 18 15
823 14.99 humidity 90 14400 > th dose dependent no NA NA
851 15.00 radiation 30 4320 < th dose independent rect. 6 3
859 15.00 radiation 10 43200 < th dose independent rect. 18 8
862 15.00 radiation 10 43200 < th dose independent rect. 18 10
863 15.00 radiation 30 4320 < th dose independent rect. 21 12
893 15.01 radiation 1 43200 > th dose independent rect. 11 3
894 15.01 radiation 1 43200 < th dose independent rect. 11 3
915 15.01 radiation 1 43200 < th dose dependent rect. 6 1
917 15.01 radiation 1 43200 < th dose dependent rect. 11 3
936 15.02 radiation 30 43200 < th dose independent rect. 3 4
954 15.02 temperature 10 1440 > th dose dependent rect. 18 2
979 15.03 radiation 1 43200 < th dose independent rect. 12 1
980 15.03 radiation 30 43200 < th dose independent rect. 5 2
988 15.03 radiation 30 43200 < th dose independent rect. 1 6
989 15.03 humidity 50 43200 < th dose independent rect. 21 12
999 15.03 temperature 30 1440 < th dose dependent rect. 19 1
1000 15.03 radiation 1 43200 < th dose dependent rect. 12 1