Os02g0629000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF584 family protein.
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Os02g0629000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF584 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 559.43 | 1.11 | 5.27 | -0.356 | 2.87 | 2.71 | -1.04 | 0.173 | 0.247 | 23 | 62.68 | 10 | 6 | 14 |
| 558.78 | 1.1 | 5.26 | -0.336 | 2.84 | 2.7 | -1.13 | -- | 0.272 | 22.9 | 63.93 | 8 | 6.02 | 14 |
| 562.59 | 1.1 | 5.26 | -0.316 | 2.71 | 2.65 | -- | 0.499 | 0.291 | 22.8 | 66 | 8 | 6.1 | 14.7 |
| 562.01 | 1.1 | 5.25 | -0.331 | 2.7 | 2.63 | -- | -- | 0.288 | 22.8 | 65.82 | 5 | 6.11 | 14.5 |
| 925.93 | 1.42 | 5.18 | -0.347 | -- | 2.2 | -- | 1.09 | 0.345 | -- | 73.03 | 2 | 6.98 | 15.2 |
| 767.74 | 1.3 | 5.24 | -0.458 | 2.29 | -- | -0.544 | -- | 0.315 | 22.3 | -- | -- | -- | -- |
| 768.89 | 1.3 | 5.24 | -0.436 | 2.29 | -- | -- | -- | 0.317 | 22.2 | -- | -- | -- | -- |
| 928.89 | 1.42 | 5.18 | -0.287 | -- | 2.2 | -- | -- | 0.344 | -- | 72.51 | 2 | 6.88 | 15.6 |
| 564.2 | 1.11 | 5.25 | -- | 2.7 | 2.67 | -- | -- | 0.328 | 22.8 | 66.24 | 5 | 6.1 | 14.5 |
| 1087.69 | 1.54 | 5.18 | -0.402 | -- | -- | -- | -- | 0.322 | -- | -- | -- | -- | -- |
| 773.89 | 1.3 | 5.23 | -- | 2.29 | -- | -- | -- | 0.366 | 22.2 | -- | -- | -- | -- |
| 811.9 | 1.33 | 5.17 | -- | -- | 2.37 | -- | -- | 0.46 | -- | 69.14 | 2 | 6.66 | 17.5 |
| 1091.96 | 1.54 | 5.17 | -- | -- | -- | -- | -- | 0.367 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 561.21 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 7 | 572.49 | humidity | 80.0 | 10 | > th | dose independent | rect. | 6 | 14 |
| 9 | 579.95 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 10 |
| 15 | 581.39 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 10 |
| 37 | 585.17 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 9 | 15 |
| 69 | 589.83 | humidity | 80.0 | 1440 | < th | dose independent | sin | 3 | NA |
| 76 | 590.56 | humidity | 80.0 | 720 | < th | dose independent | rect. | 9 | 12 |
| 78 | 591.30 | humidity | 80.0 | 1440 | > th | dose independent | sin | 2 | NA |
| 80 | 591.37 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 18 | 20 |
| 95 | 593.15 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 6 | 14 |
| 96 | 593.19 | humidity | 80.0 | 720 | > th | dose independent | rect. | 6 | 16 |
| 110 | 593.89 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 6 | 18 |
| 115 | 593.99 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 6 |
| 129 | 595.50 | humidity | 70.0 | 720 | > th | dose dependent | sin | 19 | NA |
| 131 | 595.55 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 132 | 595.77 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 13 | 12 |
| 146 | 596.69 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 158 | 597.74 | humidity | 80.0 | 720 | > th | dose independent | sin | 21 | NA |
| 166 | 598.49 | humidity | 70.0 | 720 | > th | dose independent | rect. | 13 | 20 |
| 186 | 600.01 | humidity | 80.0 | 720 | > th | dose independent | rect. | 6 | 19 |
| 191 | 600.21 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 20 | 18 |
| 215 | 601.00 | humidity | 70.0 | 720 | > th | dose independent | rect. | 13 | 12 |
| 221 | 601.35 | humidity | 80.0 | 720 | > th | dose independent | rect. | 9 | 16 |
| 226 | 601.46 | humidity | 80.0 | 720 | > th | dose independent | rect. | 8 | 14 |
| 254 | 602.68 | humidity | 80.0 | 720 | < th | dose independent | sin | 20 | NA |
| 287 | 603.44 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 9 | 5 |
| 296 | 603.82 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 23 | 15 |
| 305 | 603.98 | radiation | 1.0 | 720 | < th | dose independent | rect. | 10 | 15 |
| 309 | 604.02 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 320 | 604.22 | humidity | 80.0 | 1440 | < th | dose dependent | sin | 7 | NA |
| 427 | 606.53 | humidity | 70.0 | 1440 | > th | dose independent | sin | 7 | NA |
| 453 | 607.15 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 18 | 20 |
| 546 | 609.12 | radiation | 20.0 | 30 | < th | dose independent | rect. | 6 | 14 |
| 554 | 609.28 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 6 | 22 |
| 691 | 611.70 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 11 | 15 |
| 793 | 613.16 | radiation | 1.0 | 720 | > th | dose independent | rect. | 9 | 10 |
| 822 | 613.47 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 20 | 10 |
| 823 | 613.47 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 20 | 10 |
| 845 | 613.93 | radiation | 1.0 | 720 | < th | dose independent | rect. | 13 | 5 |
| 853 | 614.01 | humidity | 80.0 | 720 | > th | dose independent | rect. | 8 | 23 |
| 859 | 614.03 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 18 | 6 |
| 870 | 614.26 | radiation | 1.0 | 720 | < th | dose independent | rect. | 11 | 7 |
| 941 | 615.16 | humidity | 80.0 | 720 | > th | dose independent | rect. | 23 | 23 |
| 976 | 615.50 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 13 | 5 |
| 977 | 615.55 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 11 | 7 |
| 991 | 615.71 | radiation | 1.0 | 720 | < th | dose independent | rect. | 15 | 3 |