Os02g0628800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ubiquitin-like protein 5.
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Os02g0628800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ubiquitin-like protein 5.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.12 | 0.266 | 14 | -0.799 | 0.317 | -0.102 | 0.418 | -3.03 | -0.108 | 6.11 | 18.7 | 1446 | -- | -- |
| 40.34 | 0.296 | 13.9 | 0.0327 | 0.131 | -0.407 | 0.19 | -- | 0.145 | 6.99 | 22.95 | 324 | -- | -- |
| 32.49 | 0.265 | 14 | -0.786 | 0.31 | -0.113 | -- | -3.07 | -0.106 | 6.02 | 18.78 | 1629 | -- | -- |
| 40.43 | 0.296 | 13.9 | 0.0618 | 0.142 | -0.393 | -- | -- | 0.135 | 7.2 | 22.92 | 321 | -- | -- |
| 37 | 0.283 | 14 | -0.762 | -- | -0.165 | -- | -3.13 | -0.0899 | -- | 18.7 | 1963 | -- | -- |
| 42.96 | 0.307 | 13.9 | -0.0217 | 0.302 | -- | 0.329 | -- | 0.0781 | 6.36 | -- | -- | -- | -- |
| 43.21 | 0.308 | 13.9 | -0.0182 | 0.304 | -- | -- | -- | 0.0767 | 6.14 | -- | -- | -- | -- |
| 41.13 | 0.299 | 13.9 | 0.0803 | -- | -0.49 | -- | -- | 0.143 | -- | 23.54 | 363 | -- | -- |
| 40.53 | 0.297 | 13.9 | -- | 0.148 | -0.375 | -- | -- | 0.127 | 7.07 | 23 | 320 | -- | -- |
| 48 | 0.324 | 13.9 | -0.00966 | -- | -- | -- | -- | 0.0834 | -- | -- | -- | -- | -- |
| 43.22 | 0.308 | 13.9 | -- | 0.304 | -- | -- | -- | 0.0787 | 6.14 | -- | -- | -- | -- |
| 41.29 | 0.299 | 13.9 | -- | -- | -0.476 | -- | -- | 0.131 | -- | 23.7 | 363 | -- | -- |
| 48 | 0.323 | 13.9 | -- | -- | -- | -- | -- | 0.0845 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.09 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 5 |
| 2 | 31.12 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 3 | 31.17 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 3 |
| 14 | 31.27 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 156 | 31.85 | temperature | 20 | 1440 | > th | dose dependent | sin | 15 | NA |
| 195 | 31.98 | temperature | 30 | 1440 | < th | dose dependent | sin | 15 | NA |
| 202 | 31.98 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 19 |
| 327 | 32.22 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 19 |
| 446 | 32.37 | temperature | 20 | 1440 | > th | dose dependent | rect. | 10 | 21 |
| 504 | 32.42 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 513 | 32.42 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 20 |
| 538 | 32.44 | temperature | 30 | 1440 | < th | dose dependent | rect. | 9 | 20 |
| 540 | 32.44 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 23 |
| 618 | 32.49 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 768 | 32.59 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 771 | 32.60 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 833 | 32.62 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 901 | 32.65 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 991 | 32.70 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 23 |