Os02g0622200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Phosphatidylinositol N-acetylglucosaminyltransferase family protein.
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Os02g0622200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Phosphatidylinositol N-acetylglucosaminyltransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 39.38 | 0.295 | 8.44 | -0.462 | 0.435 | -1.09 | -0.243 | -0.802 | -0.127 | 7.07 | 25.2 | 30 | -- | -- |
| 40.17 | 0.297 | 8.46 | -0.591 | 0.486 | -1.06 | -0.111 | -- | -0.174 | 6.31 | 27.27 | 31 | -- | -- |
| 39.5 | 0.293 | 8.44 | -0.464 | 0.439 | -1.1 | -- | -0.79 | -0.129 | 6.86 | 25.33 | 26 | -- | -- |
| 40.12 | 0.295 | 8.45 | -0.594 | 0.493 | -1.06 | -- | -- | -0.173 | 6.35 | 27.3 | 25 | -- | -- |
| 48.65 | 0.327 | 8.44 | -0.46 | -- | -1.13 | -- | -0.871 | -0.0911 | -- | 24.24 | 12 | -- | -- |
| 56.31 | 0.352 | 8.4 | -0.331 | 0.451 | -- | -0.313 | -- | 0.0568 | 8.88 | -- | -- | -- | -- |
| 56.64 | 0.352 | 8.4 | -0.342 | 0.452 | -- | -- | -- | 0.0566 | 8.86 | -- | -- | -- | -- |
| 49.84 | 0.329 | 8.46 | -0.575 | -- | -1.03 | -- | -- | -0.135 | -- | 24.93 | 2 | -- | -- |
| 48.64 | 0.327 | 8.43 | -- | 0.456 | -0.831 | -- | -- | -0.0648 | 6.85 | 27.3 | 25 | -- | -- |
| 68.3 | 0.386 | 8.42 | -0.342 | -- | -- | -- | -- | 0.0598 | -- | -- | -- | -- | -- |
| 59.72 | 0.361 | 8.4 | -- | 0.452 | -- | -- | -- | 0.0946 | 8.92 | -- | -- | -- | -- |
| 57.9 | 0.354 | 8.44 | -- | -- | -0.844 | -- | -- | -0.045 | -- | 25.1 | 2 | -- | -- |
| 71.38 | 0.394 | 8.41 | -- | -- | -- | -- | -- | 0.0977 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.98 | temperature | 15 | 270 | > th | dose dependent | sin | 13 | NA |
| 14 | 38.76 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 8 |
| 17 | 38.84 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 6 |
| 25 | 38.90 | temperature | 15 | 720 | > th | dose dependent | rect. | 12 | 14 |
| 28 | 38.94 | temperature | 25 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 32 | 38.98 | temperature | 20 | 720 | > th | dose dependent | rect. | 12 | 19 |
| 49 | 39.13 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 51 | 39.15 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 3 |
| 67 | 39.21 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 10 |
| 69 | 39.21 | temperature | 25 | 30 | < th | dose dependent | rect. | 8 | 22 |
| 88 | 39.30 | temperature | 25 | 720 | < th | dose dependent | sin | 20 | NA |
| 120 | 39.38 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 132 | 39.40 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 138 | 39.41 | temperature | 25 | 90 | < th | dose dependent | rect. | 11 | 20 |
| 139 | 39.42 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 144 | 39.43 | temperature | 25 | 30 | < th | dose dependent | no | NA | NA |
| 149 | 39.43 | temperature | 25 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 154 | 39.44 | temperature | 25 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 161 | 39.45 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 163 | 39.46 | temperature | 25 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 171 | 39.48 | temperature | 15 | 720 | > th | dose dependent | sin | 18 | NA |
| 185 | 39.50 | temperature | 25 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 208 | 39.56 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 212 | 39.57 | temperature | 20 | 1440 | > th | dose dependent | sin | 12 | NA |
| 218 | 39.57 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 235 | 39.60 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 18 |
| 236 | 39.60 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 18 |
| 246 | 39.62 | temperature | 15 | 720 | > th | dose dependent | rect. | 6 | 20 |
| 266 | 39.65 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 15 |
| 303 | 39.71 | temperature | 25 | 4320 | < th | dose independent | rect. | 23 | 1 |
| 310 | 39.71 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 337 | 39.77 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 9 |
| 366 | 39.80 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 15 |
| 408 | 39.84 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 416 | 39.85 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 434 | 39.87 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 551 | 40.02 | temperature | 30 | 1440 | < th | dose dependent | sin | 14 | NA |
| 579 | 40.05 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 14 |
| 629 | 40.09 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 693 | 40.14 | temperature | 10 | 1440 | > th | dose dependent | sin | 14 | NA |
| 722 | 40.16 | temperature | 25 | 4320 | < th | dose independent | sin | 13 | NA |
| 757 | 40.19 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 801 | 40.23 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 852 | 40.28 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 862 | 40.29 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 978 | 40.37 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |