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Os02g0621500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Zinc finger, RING-type domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.6 (0.0136) R2 : 0.00409
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0391 (0.0285) R2dN8 : 0.00529 R2N8 : 0.00409
σ : 0.255
deviance : 29.93
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
14.29 0.178 12.5 0.704 0.364 0.895 -0.235 -3.65 0.0672 23.2 999.7 20 -- --
14.49 0.179 12.6 0.465 0.36 0.249 -0.248 -- 0.0677 23.2 999.7 20 -- --
14.53 0.178 12.5 0.714 0.365 0.897 -- -3.67 0.0683 23.3 999.7 19 -- --
14.46 0.178 12.6 0.47 0.358 0.242 -- -- 0.064 23.2 1001 8 -- --
22.81 0.224 12.5 0.633 -- 0.671 -- -2.27 0.0704 -- 999.6 7 -- --
16.13 0.188 12.6 0.422 0.367 -- -0.228 -- 0.0837 23.3 -- -- -- --
16.35 0.189 12.6 0.431 0.367 -- -- -- 0.0845 23.3 -- -- -- --
22.43 0.222 12.6 0.484 -- 0.27 -- -- 0.0647 -- 1002 41 -- --
20.17 0.21 12.6 -- 0.365 0.182 -- -- 0.0178 23.3 1002 12 -- --
24.81 0.233 12.5 0.441 -- -- -- -- 0.088 -- -- -- -- --
21.26 0.216 12.6 -- 0.372 -- -- -- 0.0364 23.4 -- -- -- --
28.48 0.249 12.6 -- -- 0.209 -- -- 0.0174 -- 1001 8 -- --
29.93 0.255 12.6 -- -- -- -- -- 0.0391 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 12.97 wind 1 14400 < th dose dependent rect. 9 3
2 12.98 temperature 30 14400 > th dose dependent rect. 8 1
17 13.01 temperature 20 270 > th dose dependent rect. 4 10
18 13.03 wind 1 14400 < th dose independent rect. 9 4
19 13.04 wind 1 43200 < th dose independent rect. 10 1
22 13.09 wind 9 14400 < th dose independent rect. 13 1
23 13.09 wind 1 14400 > th dose independent rect. 9 4
27 13.13 wind 1 43200 > th dose independent rect. 10 1
28 13.13 wind 9 14400 > th dose independent rect. 13 1
29 13.13 humidity 80 14400 < th dose dependent rect. 4 1
30 13.14 temperature 30 270 < th dose dependent rect. 1 18
31 13.15 temperature 30 14400 > th dose independent rect. 8 1
46 13.15 temperature 30 270 < th dose dependent rect. 1 16
47 13.16 wind 9 14400 > th dose independent rect. 13 4
51 13.18 wind 1 43200 < th dose dependent rect. 10 1
54 13.19 wind 9 14400 > th dose dependent rect. 12 3
63 13.22 wind 9 14400 < th dose independent rect. 13 4
68 13.24 temperature 10 90 > th dose dependent sin 2 NA
73 13.25 temperature 30 14400 < th dose independent rect. 3 6
74 13.25 temperature 30 14400 < th dose independent rect. 1 8
75 13.25 temperature 20 90 > th dose dependent sin 3 NA
76 13.25 humidity 80 14400 < th dose dependent rect. 1 1
88 13.27 temperature 30 14400 < th dose independent rect. 19 14
89 13.27 humidity 80 14400 < th dose dependent rect. 1 4
90 13.28 temperature 30 14400 < th dose independent rect. 8 1
100 13.29 temperature 25 270 > th dose dependent sin 7 NA
101 13.29 temperature 10 270 > th dose dependent sin 4 NA
106 13.29 wind 9 14400 > th dose dependent rect. 5 9
113 13.30 temperature 30 14400 < th dose independent rect. 23 10
122 13.30 wind 9 14400 > th dose dependent rect. 24 14
126 13.31 wind 9 14400 > th dose independent rect. 5 12
143 13.32 wind 9 14400 > th dose independent rect. 7 10
215 13.37 temperature 25 270 > th dose dependent rect. 19 19
217 13.38 wind 9 14400 > th dose independent sin 2 NA
245 13.39 wind 9 14400 < th dose independent rect. 3 14
268 13.40 wind 9 14400 < th dose independent rect. 4 12
291 13.41 wind 9 14400 > th dose dependent sin 2 NA
325 13.43 wind 9 14400 > th dose independent rect. 15 1
340 13.43 temperature 25 270 > th dose dependent rect. 23 15
368 13.45 temperature 30 270 < th dose dependent sin 4 NA
375 13.46 wind 9 14400 < th dose independent rect. 15 1
500 13.52 wind 9 14400 < th dose independent sin 2 NA
506 13.52 humidity 80 14400 < th dose independent rect. 19 12
527 13.53 temperature 20 10 > th dose dependent rect. 6 10
541 13.54 temperature 25 10 > th dose dependent rect. 8 8
547 13.54 temperature 25 10 > th dose dependent rect. 1 15
549 13.54 temperature 25 10 > th dose dependent rect. 23 17
550 13.54 temperature 25 10 > th dose dependent rect. 21 19
560 13.55 temperature 25 10 > th dose dependent rect. 3 13
601 13.59 wind 1 43200 < th dose independent rect. 20 3
715 13.64 humidity 80 14400 > th dose independent rect. 19 12
728 13.64 wind 9 14400 > th dose dependent rect. 18 22
730 13.65 wind 1 43200 > th dose independent rect. 20 3
764 13.66 temperature 20 720 > th dose dependent rect. 5 2
810 13.68 wind 3 14400 > th dose independent rect. 1 15
869 13.71 wind 3 14400 < th dose independent rect. 1 15
884 13.72 humidity 80 14400 < th dose independent rect. 5 1
933 13.75 humidity 80 14400 > th dose independent rect. 4 1
950 13.76 atmosphere 1000 10 > th dose independent rect. 24 23
953 13.76 temperature 20 720 > th dose dependent rect. 3 5
964 13.77 humidity 80 14400 < th dose independent rect. 1 5
998 13.79 humidity 80 14400 < th dose independent rect. 24 1