Os02g0614600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF869, plant family protein.
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Os02g0614600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF869, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 495.33 | 1.05 | 7.12 | -4.49 | 1.45 | 2.6 | -0.109 | -6.62 | -0.333 | 20.7 | 28.39 | 1259 | -- | -- |
| 499.13 | 1.04 | 6.98 | -3.15 | 1.47 | 1.99 | 0.00766 | -- | -0.266 | 20.5 | 27.39 | 1255 | -- | -- |
| 495.32 | 1.04 | 7.12 | -4.47 | 1.45 | 2.57 | -- | -6.41 | -0.354 | 20.7 | 28.27 | 1263 | -- | -- |
| 498.65 | 1.04 | 6.99 | -3.17 | 1.46 | 1.93 | -- | -- | -0.312 | 20.6 | 27.26 | 1265 | -- | -- |
| 559.71 | 1.1 | 7.09 | -3.82 | -- | 3.19 | -- | -2.47 | -0.794 | -- | 24.26 | 891 | -- | -- |
| 659.46 | 1.2 | 7 | -2.59 | 1.59 | -- | 0.167 | -- | -0.348 | 21.4 | -- | -- | -- | -- |
| 659.56 | 1.2 | 7 | -2.59 | 1.59 | -- | -- | -- | -0.348 | 21.4 | -- | -- | -- | -- |
| 560.94 | 1.1 | 7.04 | -3.35 | -- | 2.93 | -- | -- | -0.708 | -- | 24.02 | 888 | -- | -- |
| 742.53 | 1.27 | 6.86 | -- | 1.49 | 1.39 | -- | -- | 0.256 | 20.8 | 30.4 | 1214 | -- | -- |
| 807.97 | 1.33 | 6.96 | -2.59 | -- | -- | -- | -- | -0.354 | -- | -- | -- | -- | -- |
| 837.02 | 1.35 | 6.94 | -- | 1.59 | -- | -- | -- | -0.0587 | 21.3 | -- | -- | -- | -- |
| 835.66 | 1.35 | 6.92 | -- | -- | 2.22 | -- | -- | -0.201 | -- | 24.8 | 866 | -- | -- |
| 984.38 | 1.46 | 6.89 | -- | -- | -- | -- | -- | -0.0666 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 494.88 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 3 | 500.48 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 4 | 500.49 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 3 |
| 18 | 500.65 | temperature | 30 | 1440 | < th | dose independent | sin | 11 | NA |
| 19 | 501.06 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 9 |
| 20 | 501.06 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 11 |
| 24 | 501.18 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 16 |
| 26 | 501.26 | temperature | 30 | 1440 | > th | dose independent | sin | 12 | NA |
| 31 | 501.32 | radiation | 40 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 48 | 501.37 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 3 |
| 54 | 501.94 | radiation | 30 | 4320 | > th | dose independent | rect. | 16 | 16 |
| 56 | 502.92 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 18 |
| 60 | 503.31 | temperature | 30 | 1440 | > th | dose dependent | sin | 14 | NA |
| 62 | 503.38 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 20 |
| 66 | 503.52 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 18 |
| 68 | 503.58 | temperature | 30 | 1440 | > th | dose dependent | sin | 11 | NA |
| 80 | 504.15 | temperature | 30 | 1440 | > th | dose dependent | rect. | 13 | 21 |
| 99 | 504.20 | temperature | 30 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 251 | 504.94 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 354 | 505.24 | radiation | 30 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 383 | 505.49 | radiation | 10 | 1440 | > th | dose dependent | rect. | 16 | 14 |
| 402 | 505.54 | radiation | 10 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 447 | 506.22 | humidity | 70 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 469 | 507.08 | humidity | 70 | 4320 | < th | dose dependent | rect. | 18 | 2 |
| 491 | 507.25 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 505 | 507.26 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 16 |
| 506 | 507.26 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 18 |
| 507 | 507.28 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 514 | 507.37 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 551 | 507.56 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 571 | 507.78 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 19 |
| 572 | 507.78 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 21 |
| 581 | 507.83 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 23 |
| 585 | 507.85 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 23 |
| 596 | 507.88 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 598 | 507.89 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 13 |
| 652 | 507.96 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 17 |
| 688 | 508.28 | temperature | 30 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 691 | 508.34 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 699 | 508.43 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 897 | 509.37 | humidity | 70 | 1440 | < th | dose independent | rect. | 18 | 13 |
| 898 | 509.41 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 919 | 509.59 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 964 | 509.97 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 11 |
| 994 | 510.26 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 8 |