Os02g0614100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF250 domain containing protein.
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Os02g0614100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF250 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 70.13 | 0.393 | 12.4 | -0.00859 | 1.5 | 0.721 | -0.37 | -1.26 | 0.333 | 16.4 | 19.97 | 1301 | -- | -- |
| 73.85 | 0.4 | 12.4 | -0.0216 | 1.49 | 0.717 | -0.515 | -- | 0.322 | 16.4 | 19.97 | 1296 | -- | -- |
| 70.45 | 0.391 | 12.4 | -0.00822 | 1.49 | 0.718 | -- | -1.3 | 0.332 | 16.5 | 19.97 | 1297 | -- | -- |
| 74.44 | 0.402 | 12.4 | -0.0348 | 1.49 | 0.739 | -- | -- | 0.338 | 16.5 | 19.97 | 1297 | -- | -- |
| 189.77 | 0.642 | 12.4 | -0.0635 | -- | 0.897 | -- | -1.16 | 0.332 | -- | 19.98 | 1298 | -- | -- |
| 89.79 | 0.444 | 12.4 | -0.155 | 1.55 | -- | -0.492 | -- | 0.152 | 16.1 | -- | -- | -- | -- |
| 90.46 | 0.445 | 12.4 | -0.161 | 1.55 | -- | -- | -- | 0.149 | 16.1 | -- | -- | -- | -- |
| 191.89 | 0.645 | 12.4 | -0.064 | -- | 0.859 | -- | -- | 0.326 | -- | 27.27 | 1302 | -- | -- |
| 74.58 | 0.402 | 12.4 | -- | 1.49 | 0.736 | -- | -- | 0.338 | 16.5 | 19.9 | 1290 | -- | -- |
| 220.42 | 0.694 | 12.4 | -0.224 | -- | -- | -- | -- | 0.108 | -- | -- | -- | -- | -- |
| 91.14 | 0.447 | 12.4 | -- | 1.55 | -- | -- | -- | 0.167 | 16.1 | -- | -- | -- | -- |
| 191.81 | 0.645 | 12.4 | -- | -- | 0.887 | -- | -- | 0.289 | -- | 27.23 | 1302 | -- | -- |
| 221.74 | 0.695 | 12.4 | -- | -- | -- | -- | -- | 0.133 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 69.17 | temperature | 20 | 90 | > th | dose independent | rect. | 21 | 6 |
| 3 | 69.46 | temperature | 20 | 10 | > th | dose independent | rect. | 21 | 7 |
| 6 | 70.39 | humidity | 80 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 23 | 72.21 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 8 |
| 27 | 72.35 | radiation | 30 | 1440 | < th | dose dependent | rect. | 8 | 5 |
| 28 | 72.43 | radiation | 20 | 1440 | < th | dose independent | rect. | 7 | 7 |
| 29 | 72.49 | radiation | 20 | 1440 | < th | dose independent | rect. | 8 | 5 |
| 43 | 72.78 | radiation | 20 | 1440 | < th | dose independent | rect. | 1 | 13 |
| 44 | 72.78 | radiation | 20 | 1440 | < th | dose independent | rect. | 23 | 15 |
| 51 | 72.79 | radiation | 20 | 1440 | < th | dose independent | rect. | 18 | 20 |
| 59 | 72.93 | radiation | 40 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 84 | 73.12 | radiation | 1 | 1440 | > th | dose dependent | rect. | 8 | 6 |
| 86 | 73.15 | radiation | 10 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 108 | 73.26 | radiation | 20 | 1440 | < th | dose independent | sin | 3 | NA |
| 112 | 73.27 | temperature | 20 | 90 | > th | dose independent | rect. | 17 | 10 |
| 123 | 73.32 | radiation | 20 | 1440 | > th | dose independent | rect. | 8 | 5 |
| 146 | 73.45 | radiation | 30 | 1440 | < th | dose dependent | rect. | 17 | 21 |
| 148 | 73.46 | radiation | 30 | 1440 | < th | dose dependent | rect. | 23 | 15 |
| 151 | 73.47 | radiation | 30 | 1440 | < th | dose dependent | rect. | 1 | 13 |
| 201 | 73.56 | radiation | 20 | 90 | < th | dose dependent | rect. | 7 | 20 |
| 267 | 73.69 | radiation | 20 | 1440 | < th | dose independent | rect. | 7 | 21 |
| 273 | 73.70 | radiation | 20 | 1440 | < th | dose independent | rect. | 7 | 19 |
| 277 | 73.70 | radiation | 30 | 1440 | < th | dose dependent | sin | 2 | NA |
| 332 | 73.82 | temperature | 15 | 90 | > th | dose dependent | rect. | 20 | 7 |
| 423 | 73.92 | radiation | 30 | 1440 | < th | dose dependent | rect. | 7 | 20 |
| 455 | 73.94 | radiation | 20 | 1440 | < th | dose independent | no | NA | NA |
| 488 | 73.94 | radiation | 30 | 1440 | < th | dose dependent | rect. | 7 | 17 |
| 559 | 73.99 | temperature | 20 | 90 | < th | dose independent | rect. | 17 | 13 |
| 579 | 74.01 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 580 | 74.01 | radiation | 1 | 1440 | > th | dose dependent | sin | 2 | NA |
| 606 | 74.07 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 8 |
| 782 | 74.22 | radiation | 20 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 912 | 74.31 | radiation | 30 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 920 | 74.32 | radiation | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 952 | 74.33 | radiation | 1 | 1440 | > th | dose dependent | rect. | 11 | 23 |