Os02g0607700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glucose/ribitol dehydrogenase family protein.
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Os02g0607700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glucose/ribitol dehydrogenase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 102.36 | 0.475 | 8.15 | 1.54 | 1.1 | -1.49 | -1.07 | 2.18 | 0.283 | 6.72 | 24.8 | 729 | -- | -- |
| 108.19 | 0.484 | 8.12 | 1.98 | 1.11 | -1.56 | -0.92 | -- | 0.403 | 6.64 | 23.89 | 745 | -- | -- |
| 103.42 | 0.474 | 8.16 | 1.49 | 0.958 | -1.52 | -- | 2.14 | 0.283 | 6.68 | 24.61 | 1121 | -- | -- |
| 107.75 | 0.483 | 8.1 | 1.88 | 1.01 | -1.8 | -- | -- | 0.396 | 6.78 | 23.65 | 939 | -- | -- |
| 148.41 | 0.567 | 8.2 | 1.38 | -- | -1.58 | -- | 2.67 | 0.239 | -- | 25.41 | 1323 | -- | -- |
| 150.79 | 0.576 | 8.04 | 2.38 | 0.983 | -- | -0.695 | -- | 0.706 | 6.01 | -- | -- | -- | -- |
| 151.97 | 0.577 | 8.04 | 2.37 | 0.98 | -- | -- | -- | 0.709 | 6.06 | -- | -- | -- | -- |
| 154.91 | 0.58 | 8.13 | 1.83 | -- | -1.96 | -- | -- | 0.379 | -- | 23.53 | 1285 | -- | -- |
| 114.87 | 0.499 | 8.12 | -- | 1.14 | -2.36 | -- | -- | 0.0825 | 5.9 | 19.1 | 46976 | -- | -- |
| 201.7 | 0.664 | 8.05 | 2.4 | -- | -- | -- | -- | 0.731 | -- | -- | -- | -- | -- |
| 300.2 | 0.81 | 8.09 | -- | 1.01 | -- | -- | -- | 0.444 | 5.94 | -- | -- | -- | -- |
| 158.76 | 0.587 | 8.21 | -- | -- | -2.49 | -- | -- | 0.0148 | -- | 19.6 | 28612 | -- | -- |
| 353.6 | 0.878 | 8.11 | -- | -- | -- | -- | -- | 0.464 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 92.69 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 11 | 93.53 | humidity | 90 | 14400 | > th | dose dependent | rect. | 14 | 16 |
| 14 | 93.64 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 17 | 93.79 | humidity | 90 | 14400 | > th | dose dependent | sin | 8 | NA |
| 22 | 93.87 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 13 |
| 31 | 93.99 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 8 |
| 137 | 95.37 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 6 |
| 189 | 96.23 | radiation | 1 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 203 | 96.41 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 226 | 96.73 | radiation | 1 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 229 | 96.76 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 266 | 97.43 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 8 |
| 269 | 97.45 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 282 | 97.65 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 295 | 98.33 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 316 | 98.79 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 326 | 99.23 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 12 |
| 334 | 99.36 | temperature | 25 | 4320 | > th | dose independent | rect. | 11 | 2 |
| 335 | 99.36 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 336 | 99.39 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 343 | 99.43 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 349 | 99.45 | humidity | 90 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 356 | 99.50 | temperature | 25 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 362 | 99.54 | humidity | 90 | 43200 | > th | dose dependent | rect. | 12 | 3 |
| 373 | 99.66 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 376 | 99.69 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 390 | 99.80 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 12 |
| 402 | 99.91 | temperature | 25 | 4320 | > th | dose independent | rect. | 10 | 5 |
| 417 | 100.02 | temperature | 25 | 1440 | < th | dose dependent | sin | 11 | NA |
| 422 | 100.05 | temperature | 25 | 4320 | < th | dose independent | rect. | 10 | 4 |
| 479 | 100.30 | radiation | 30 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 481 | 100.30 | wind | 3 | 43200 | < th | dose dependent | rect. | 20 | 2 |
| 512 | 100.43 | temperature | 25 | 720 | < th | dose dependent | rect. | 14 | 19 |
| 539 | 100.56 | radiation | 1 | 43200 | < th | dose independent | rect. | 11 | 3 |
| 555 | 100.62 | radiation | 1 | 43200 | > th | dose independent | rect. | 11 | 3 |
| 559 | 100.63 | radiation | 1 | 43200 | < th | dose dependent | rect. | 11 | 3 |
| 574 | 100.67 | radiation | 1 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 591 | 100.71 | radiation | 1 | 43200 | < th | dose dependent | rect. | 13 | 2 |
| 624 | 100.84 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 2 |
| 687 | 101.06 | temperature | 10 | 1440 | > th | dose dependent | sin | 11 | NA |
| 716 | 101.15 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 2 |
| 760 | 101.25 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 775 | 101.27 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 21 | 16 |
| 828 | 101.44 | radiation | 20 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 837 | 101.47 | wind | 9 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 845 | 101.49 | humidity | 90 | 43200 | > th | dose independent | rect. | 12 | 3 |
| 865 | 101.53 | wind | 3 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 916 | 101.62 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 962 | 101.77 | radiation | 40 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 974 | 101.81 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 22 | 14 |