Os02g0606700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0606700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 192.59 | 0.652 | 6.59 | -0.775 | 1.34 | 0.956 | 1.44 | -2.12 | -0.249 | 6.97 | 69.61 | 1338 | -- | -- |
| 196.69 | 0.653 | 6.58 | -0.662 | 1.34 | 0.754 | 1.44 | -- | -0.319 | 7.03 | 76.17 | 1339 | -- | -- |
| 197.85 | 0.655 | 6.59 | -0.745 | 1.34 | 0.954 | -- | -2.14 | -0.247 | 6.85 | 69.17 | 1341 | -- | -- |
| 202.04 | 0.662 | 6.58 | -0.638 | 1.34 | 0.73 | -- | -- | -0.323 | 6.82 | 76.07 | 1376 | -- | -- |
| 292.22 | 0.796 | 6.63 | -0.752 | -- | 0.964 | -- | -1.83 | -0.28 | -- | 73.47 | 1354 | -- | -- |
| 210.04 | 0.679 | 6.59 | -0.526 | 1.36 | -- | 1.42 | -- | -0.367 | 6.77 | -- | -- | -- | -- |
| 215.07 | 0.687 | 6.59 | -0.504 | 1.36 | -- | -- | -- | -0.372 | 6.65 | -- | -- | -- | -- |
| 295.57 | 0.801 | 6.61 | -0.62 | -- | 0.819 | -- | -- | -0.307 | -- | 79 | 1361 | -- | -- |
| 212.4 | 0.679 | 6.57 | -- | 1.36 | 0.601 | -- | -- | -0.282 | 6.75 | 78.87 | 1430 | -- | -- |
| 312.14 | 0.826 | 6.62 | -0.472 | -- | -- | -- | -- | -0.344 | -- | -- | -- | -- | -- |
| 221.77 | 0.697 | 6.58 | -- | 1.36 | -- | -- | -- | -0.316 | 6.67 | -- | -- | -- | -- |
| 304.92 | 0.813 | 6.6 | -- | -- | 0.727 | -- | -- | -0.271 | -- | 85.4 | 1365 | -- | -- |
| 318.01 | 0.832 | 6.61 | -- | -- | -- | -- | -- | -0.292 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 182.91 | humidity | 70 | 720 | > th | dose independent | rect. | 19 | 8 |
| 2 | 185.68 | wind | 3 | 43200 | > th | dose dependent | rect. | 19 | 10 |
| 3 | 185.94 | wind | 3 | 43200 | > th | dose dependent | rect. | 20 | 8 |
| 5 | 186.11 | wind | 5 | 43200 | < th | dose independent | rect. | 23 | 16 |
| 9 | 186.28 | wind | 5 | 43200 | > th | dose independent | rect. | 23 | 16 |
| 11 | 186.38 | wind | 5 | 43200 | < th | dose independent | rect. | 18 | 20 |
| 16 | 186.66 | wind | 5 | 43200 | > th | dose independent | rect. | 18 | 20 |
| 25 | 186.84 | humidity | 70 | 720 | < th | dose independent | rect. | 19 | 13 |
| 29 | 186.89 | wind | 5 | 43200 | < th | dose independent | rect. | 19 | 11 |
| 44 | 187.14 | wind | 5 | 43200 | > th | dose independent | rect. | 18 | 13 |
| 46 | 187.15 | wind | 5 | 43200 | < th | dose independent | sin | 11 | NA |
| 53 | 187.25 | wind | 5 | 43200 | > th | dose independent | rect. | 19 | 11 |
| 55 | 187.26 | wind | 5 | 43200 | > th | dose independent | sin | 11 | NA |
| 57 | 187.27 | wind | 5 | 43200 | > th | dose independent | rect. | 19 | 9 |
| 68 | 187.38 | wind | 5 | 43200 | < th | dose independent | sin | 4 | NA |
| 72 | 187.44 | wind | 5 | 43200 | > th | dose independent | sin | 4 | NA |
| 74 | 187.46 | wind | 5 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 78 | 187.50 | wind | 3 | 43200 | > th | dose dependent | sin | 10 | NA |
| 86 | 187.60 | wind | 5 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 87 | 187.62 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 91 | 187.69 | wind | 5 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 96 | 187.74 | wind | 3 | 43200 | > th | dose dependent | rect. | 19 | 19 |
| 97 | 187.75 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 102 | 187.78 | humidity | 70 | 1440 | < th | dose dependent | rect. | 18 | 14 |
| 111 | 187.87 | wind | 3 | 43200 | > th | dose dependent | rect. | 21 | 17 |
| 154 | 188.23 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 2 |
| 174 | 188.29 | wind | 5 | 43200 | > th | dose dependent | sin | 5 | NA |
| 191 | 188.38 | humidity | 70 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 219 | 188.43 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 11 |
| 224 | 188.45 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 9 |
| 264 | 188.61 | wind | 3 | 43200 | > th | dose dependent | rect. | 23 | 2 |
| 269 | 188.62 | temperature | 30 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 340 | 188.77 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 14 |
| 371 | 188.90 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 1 |
| 396 | 188.94 | humidity | 70 | 1440 | > th | dose independent | rect. | 19 | 13 |
| 400 | 188.95 | wind | 3 | 43200 | > th | dose dependent | rect. | 10 | 3 |
| 409 | 188.98 | wind | 9 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 415 | 189.01 | wind | 1 | 43200 | > th | dose dependent | rect. | 23 | 5 |
| 486 | 189.37 | wind | 5 | 43200 | > th | dose dependent | rect. | 6 | 8 |
| 510 | 189.44 | humidity | 70 | 1440 | > th | dose independent | rect. | 19 | 3 |
| 512 | 189.45 | humidity | 70 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 514 | 189.45 | wind | 1 | 43200 | > th | dose dependent | rect. | 2 | 1 |
| 522 | 189.47 | wind | 9 | 43200 | < th | dose dependent | rect. | 24 | 4 |
| 566 | 189.59 | wind | 9 | 43200 | < th | dose dependent | rect. | 21 | 8 |
| 608 | 189.72 | humidity | 70 | 1440 | < th | dose dependent | rect. | 16 | 3 |
| 632 | 189.79 | humidity | 50 | 1440 | > th | dose independent | rect. | 15 | 2 |
| 637 | 189.80 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 2 |
| 752 | 190.02 | radiation | 40 | 1440 | > th | dose dependent | rect. | 13 | 20 |
| 789 | 190.14 | radiation | 40 | 1440 | > th | dose dependent | rect. | 13 | 2 |
| 850 | 190.31 | radiation | 20 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 892 | 190.35 | wind | 3 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 902 | 190.39 | wind | 5 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 943 | 190.48 | humidity | 70 | 1440 | < th | dose dependent | sin | 12 | NA |