Os02g0606100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0606100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.62 | 0.276 | 9.3 | -0.235 | 0.562 | -1.6 | -0.384 | -0.206 | -0.103 | 5.2 | 30.33 | 275 | -- | -- |
| 34.65 | 0.274 | 9.31 | -0.269 | 0.56 | -1.6 | -0.438 | -- | -0.11 | 5.21 | 30.47 | 276 | -- | -- |
| 34.91 | 0.275 | 9.3 | -0.195 | 0.567 | -1.62 | -- | -0.453 | -0.0882 | 5.23 | 30.55 | 276 | -- | -- |
| 35.1 | 0.276 | 9.3 | -0.267 | 0.564 | -1.62 | -- | -- | -0.098 | 5.27 | 30.9 | 278 | -- | -- |
| 38.23 | 0.288 | 9.3 | -0.195 | -- | -1.59 | -- | -0.778 | -0.0789 | -- | 24.36 | 1371 | -- | -- |
| 67.38 | 0.385 | 9.25 | 0.123 | 0.0873 | -- | -0.651 | -- | 0.192 | 5.69 | -- | -- | -- | -- |
| 68.1 | 0.386 | 9.24 | 0.122 | 0.111 | -- | -- | -- | 0.196 | 8.38 | -- | -- | -- | -- |
| 38.75 | 0.29 | 9.32 | -0.344 | -- | -1.5 | -- | -- | -0.122 | -- | 25.08 | 1406 | -- | -- |
| 36.89 | 0.283 | 9.29 | -- | 0.536 | -1.57 | -- | -- | -0.0519 | 5.38 | 31.3 | 274 | -- | -- |
| 68.79 | 0.388 | 9.25 | 0.123 | -- | -- | -- | -- | 0.197 | -- | -- | -- | -- | -- |
| 68.49 | 0.387 | 9.25 | -- | 0.112 | -- | -- | -- | 0.182 | 8.3 | -- | -- | -- | -- |
| 41.14 | 0.299 | 9.3 | -- | -- | -1.32 | -- | -- | -0.054 | -- | 25.24 | 1372 | -- | -- |
| 69.18 | 0.388 | 9.25 | -- | -- | -- | -- | -- | 0.183 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.51 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 23 |
| 4 | 34.38 | temperature | 30 | 270 | < th | dose dependent | rect. | 16 | 23 |
| 8 | 34.65 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 17 | 34.99 | temperature | 30 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 20 | 35.22 | temperature | 15 | 270 | > th | dose dependent | rect. | 7 | 23 |
| 30 | 35.58 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 32 | 35.66 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 11 |
| 34 | 35.70 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 8 |
| 36 | 35.72 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 5 |
| 43 | 35.74 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 17 |
| 82 | 35.90 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 10 |
| 83 | 35.90 | temperature | 25 | 1440 | < th | dose dependent | sin | 10 | NA |
| 94 | 35.92 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 20 |
| 109 | 35.97 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 137 | 36.09 | temperature | 20 | 1440 | > th | dose independent | sin | 10 | NA |
| 144 | 36.13 | temperature | 15 | 1440 | > th | dose dependent | rect. | 22 | 7 |
| 209 | 36.31 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 214 | 36.32 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 3 |
| 265 | 36.41 | temperature | 20 | 1440 | < th | dose independent | sin | 10 | NA |
| 275 | 36.42 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 368 | 36.54 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 522 | 36.77 | temperature | 15 | 1440 | > th | dose dependent | sin | 9 | NA |
| 548 | 36.82 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 842 | 37.32 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 874 | 37.37 | temperature | 25 | 1440 | < th | dose dependent | rect. | 6 | 23 |
| 940 | 37.46 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 947 | 37.47 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 23 |