Os02g0603800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Isoprenoid biosynthesis-like protein (Fragment).
FiT-DB / Search/ Help/ Sample detail
|
Os02g0603800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Isoprenoid biosynthesis-like protein (Fragment).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.81 | 0.293 | 14 | 0.441 | 1.66 | 0.896 | 0.816 | -3.57 | -0.0835 | 7.61 | 29.5 | 415 | -- | -- |
| 42.62 | 0.304 | 14 | 0.214 | 1.61 | 0.718 | 0.939 | -- | -0.0122 | 7.48 | 28.7 | 563 | -- | -- |
| 40.61 | 0.297 | 14 | 0.441 | 1.66 | 0.896 | -- | -2.87 | -0.0835 | 7.61 | 29.5 | 415 | -- | -- |
| 40.68 | 0.297 | 14 | 0.144 | 1.53 | 0.637 | -- | -- | -0.108 | 7.57 | 28.3 | 480 | -- | -- |
| 122.21 | 0.515 | 14 | 0.755 | -- | 1.92 | -- | -2.77 | 0.163 | -- | 28.46 | 567 | -- | -- |
| 47.3 | 0.322 | 14 | -0.0196 | 1.9 | -- | 0.763 | -- | -0.166 | 7.31 | -- | -- | -- | -- |
| 48.84 | 0.327 | 14 | -0.0039 | 1.91 | -- | -- | -- | -0.168 | 7.26 | -- | -- | -- | -- |
| 123.76 | 0.518 | 14 | 0.343 | -- | 1.7 | -- | -- | 0.0707 | -- | 28.26 | 551 | -- | -- |
| 40.81 | 0.298 | 14 | -- | 1.58 | 0.589 | -- | -- | -0.105 | 7.56 | 28.4 | 496 | -- | -- |
| 241.44 | 0.726 | 14.1 | 0.0296 | -- | -- | -- | -- | -0.135 | -- | -- | -- | -- | -- |
| 48.84 | 0.327 | 14 | -- | 1.91 | -- | -- | -- | -0.167 | 7.26 | -- | -- | -- | -- |
| 126.91 | 0.525 | 14 | -- | -- | 1.66 | -- | -- | 0.0303 | -- | 28.21 | 541 | -- | -- |
| 241.46 | 0.725 | 14.1 | -- | -- | -- | -- | -- | -0.139 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.91 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 12 | 7 |
| 9 | 32.47 | temperature | 25.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 21 | 33.15 | temperature | 25.0 | 270 | > th | dose independent | rect. | 14 | 3 |
| 22 | 33.23 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 14 | 3 |
| 56 | 34.07 | radiation | 1.0 | 270 | < th | dose independent | sin | 15 | NA |
| 63 | 34.38 | radiation | 1.0 | 270 | < th | dose dependent | sin | 15 | NA |
| 64 | 34.39 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 16 | 4 |
| 67 | 34.49 | humidity | 90.0 | 270 | < th | dose independent | rect. | 13 | 6 |
| 70 | 34.54 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 14 | 6 |
| 79 | 34.62 | radiation | 1.0 | 270 | < th | dose independent | rect. | 16 | 11 |
| 104 | 34.91 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 16 | 11 |
| 111 | 34.99 | radiation | 1.0 | 270 | > th | dose independent | sin | 15 | NA |
| 112 | 34.99 | humidity | 90.0 | 270 | < th | dose independent | rect. | 14 | 3 |
| 126 | 35.09 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 18 |
| 139 | 35.24 | radiation | 1.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 172 | 35.44 | wind | 3.0 | 270 | > th | dose independent | rect. | 13 | 5 |
| 176 | 35.47 | temperature | 25.0 | 10 | > th | dose independent | rect. | 14 | 6 |
| 227 | 35.76 | wind | 1.0 | 270 | > th | dose independent | rect. | 18 | 8 |
| 236 | 35.83 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 258 | 35.94 | humidity | 60.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 262 | 35.95 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 10 |
| 272 | 35.99 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 6 |
| 279 | 36.02 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 6 |
| 281 | 36.02 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 6 |
| 283 | 36.03 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 285 | 36.04 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 291 | 36.05 | wind | 3.0 | 270 | > th | dose independent | rect. | 14 | 3 |
| 295 | 36.06 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 296 | 36.06 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 6 |
| 297 | 36.06 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 18 |
| 302 | 36.08 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 18 |
| 303 | 36.08 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 18 |
| 305 | 36.08 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 18 |
| 313 | 36.10 | wind | 9.0 | 270 | < th | dose independent | rect. | 18 | 19 |
| 314 | 36.10 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 21 |
| 321 | 36.14 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 5 |
| 322 | 36.14 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 5 |
| 326 | 36.15 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 19 |
| 327 | 36.15 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 19 |
| 335 | 36.19 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 21 |
| 351 | 36.23 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 5 |
| 352 | 36.23 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 5 |
| 355 | 36.23 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 13 | 5 |
| 358 | 36.23 | temperature | 10.0 | 270 | > th | dose independent | rect. | 18 | 19 |
| 378 | 36.28 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 19 |
| 400 | 36.33 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 3 |
| 401 | 36.33 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 3 |
| 403 | 36.33 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 14 | 3 |
| 405 | 36.33 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 3 |
| 407 | 36.33 | temperature | 10.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 409 | 36.33 | radiation | 20.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 412 | 36.33 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 15 |
| 413 | 36.33 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 415 | 36.33 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 21 |
| 416 | 36.33 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 3 |
| 431 | 36.37 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 21 |
| 435 | 36.37 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 21 |
| 441 | 36.40 | wind | 1.0 | 270 | > th | dose dependent | rect. | 14 | 3 |
| 442 | 36.41 | wind | 9.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 455 | 36.45 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 524 | 36.55 | wind | 1.0 | 270 | > th | dose dependent | rect. | 13 | 5 |
| 534 | 36.57 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 16 |
| 551 | 36.62 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 15 |
| 552 | 36.62 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 21 |
| 554 | 36.62 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 15 |
| 571 | 36.65 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 5 |
| 577 | 36.66 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 595 | 36.69 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 15 | 2 |
| 600 | 36.70 | humidity | 50.0 | 270 | > th | dose independent | rect. | 18 | 19 |
| 605 | 36.71 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 3 |
| 622 | 36.76 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 7 |
| 625 | 36.76 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 18 |
| 636 | 36.77 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 9 |
| 646 | 36.77 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 9 |
| 663 | 36.81 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 3 |
| 664 | 36.81 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 21 |
| 673 | 36.84 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 14 | 17 |
| 702 | 36.90 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 711 | 36.92 | humidity | 90.0 | 270 | < th | dose independent | rect. | 7 | 6 |
| 715 | 36.92 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 14 | 4 |
| 773 | 36.98 | wind | 1.0 | 270 | > th | dose independent | rect. | 18 | 19 |
| 853 | 37.06 | radiation | 40.0 | 90 | < th | dose independent | rect. | 15 | 18 |
| 891 | 37.11 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 22 | 10 |