Os02g0596100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : GLE1-like family protein.
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Os02g0596100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : GLE1-like family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.78 | 0.192 | 10 | 0.0238 | 0.062 | -0.547 | -0.231 | -0.576 | 0.158 | 21.1 | 28.19 | 252 | -- | -- |
| 17.14 | 0.193 | 10 | -0.0698 | 0.0779 | -0.542 | -0.225 | -- | 0.147 | 22.6 | 29.82 | 217 | -- | -- |
| 16.96 | 0.192 | 10 | 0.0301 | 0.0659 | -0.559 | -- | -0.583 | 0.153 | 21.7 | 28.17 | 236 | -- | -- |
| 17.37 | 0.194 | 10 | -0.0631 | 0.0781 | -0.539 | -- | -- | 0.144 | 22 | 29.41 | 218 | -- | -- |
| 17.21 | 0.193 | 10 | 0.0436 | -- | -0.553 | -- | -0.624 | 0.163 | -- | 28.24 | 253 | -- | -- |
| 21.36 | 0.217 | 10 | 0.0678 | 0.181 | -- | 0.0767 | -- | 0.247 | 17.4 | -- | -- | -- | -- |
| 21.37 | 0.216 | 10 | 0.0674 | 0.182 | -- | -- | -- | 0.248 | 17.6 | -- | -- | -- | -- |
| 17.58 | 0.195 | 10 | -0.0728 | -- | -0.551 | -- | -- | 0.134 | -- | 29.25 | 283 | -- | -- |
| 17.48 | 0.195 | 10 | -- | 0.0744 | -0.513 | -- | -- | 0.148 | 21.6 | 29.32 | 216 | -- | -- |
| 23.09 | 0.225 | 10 | 0.0615 | -- | -- | -- | -- | 0.243 | -- | -- | -- | -- | -- |
| 21.49 | 0.217 | 10 | -- | 0.181 | -- | -- | -- | 0.24 | 17.6 | -- | -- | -- | -- |
| 17.7 | 0.196 | 10 | -- | -- | -0.533 | -- | -- | 0.15 | -- | 30.05 | 280 | -- | -- |
| 23.19 | 0.225 | 10 | -- | -- | -- | -- | -- | 0.236 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.24 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 5 |
| 2 | 16.25 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 5 |
| 3 | 16.28 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 21 |
| 12 | 16.36 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 25 | 16.45 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 69 | 16.65 | temperature | 15 | 720 | > th | dose dependent | sin | 7 | NA |
| 104 | 16.73 | temperature | 30 | 720 | < th | dose dependent | sin | 7 | NA |
| 121 | 16.74 | temperature | 25 | 1440 | < th | dose dependent | rect. | 7 | 19 |
| 122 | 16.75 | temperature | 25 | 1440 | < th | dose dependent | rect. | 7 | 16 |
| 137 | 16.76 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 273 | 16.87 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 8 |
| 319 | 16.89 | temperature | 25 | 1440 | < th | dose dependent | sin | 1 | NA |
| 321 | 16.89 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 372 | 16.91 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 8 |
| 373 | 16.91 | temperature | 25 | 1440 | < th | dose dependent | sin | 20 | NA |
| 376 | 16.91 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 423 | 16.93 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 447 | 16.94 | temperature | 20 | 1440 | > th | dose independent | rect. | 19 | 12 |
| 470 | 16.95 | temperature | 20 | 1440 | > th | dose independent | rect. | 19 | 14 |
| 500 | 16.96 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 8 |
| 508 | 16.96 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 569 | 16.98 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 606 | 17.00 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 629 | 17.01 | temperature | 25 | 270 | < th | dose dependent | sin | 1 | NA |
| 703 | 17.04 | temperature | 20 | 4320 | > th | dose independent | sin | 19 | NA |
| 763 | 17.06 | temperature | 20 | 1440 | > th | dose independent | sin | 11 | NA |
| 851 | 17.08 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 947 | 17.12 | temperature | 20 | 1440 | < th | dose independent | sin | 11 | NA |
| 955 | 17.12 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 18 |