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Os02g0593500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Phosphate transporter family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.4 (0.0216) R2 : 0.82
β1 : -- (--) R2dD : -- R2D : --
β2 : 3.17 (0.0701) R2dC : 1.29 R2C : 0.302
β3 : 1.85 (0.0647) R2dE : 0.508 R2E : -0.463
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.222 (0.0453) R2dN8 : 0.0113 R2N8 : -0.00435
σ : 0.404
deviance : 75.4
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_____
C
peak time of C : 7.26
E
wheather : radiation
threshold : 3.429e-05
memory length : 38
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 10.5
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
65.53 0.38 13.4 -0.522 3.19 1.82 -0.148 -0.931 -0.266 7.28 0.2455 42 10.2 --
67.21 0.382 13.4 -0.558 3.17 1.81 0.636 -- -0.269 7.27 0.2688 44 10.3 --
65.48 0.377 13.4 -0.54 3.2 1.84 -- -0.855 -0.264 7.28 0.2581 44 10.4 --
68.23 0.385 13.4 -0.535 3.18 1.84 -- -- -0.265 7.26 0.2347 44 10.4 --
136.54 0.544 13.3 -0.4 -- 2.2 -- 1.35 -0.18 -- 0.7795 737 7.44 --
115.12 0.503 13.5 -0.681 2.37 -- 0.466 -- -0.278 5.28 -- -- -- --
115.66 0.504 13.5 -0.68 2.37 -- -- -- -0.28 5.26 -- -- -- --
107.79 0.484 13.5 -0.313 -- 3.45 -- -- -0.168 -- 1.426 907 11.3 --
75.4 0.404 13.4 -- 3.17 1.85 -- -- -0.222 7.26 3.429e-05 38 10.5 --
408.5 0.944 13.5 -0.598 -- -- -- -- -0.221 -- -- -- -- --
127.86 0.529 13.4 -- 2.36 -- -- -- -0.205 5.27 -- -- -- --
110.19 0.489 13.5 -- -- 3.53 -- -- -0.113 -- 0.9958 901 11 --
417.94 0.954 13.5 -- -- -- -- -- -0.155 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 60.92 radiation 1.0 270 > th dose independent rect. 11 5
3 61.22 wind 9.0 270 < th dose independent rect. 11 5
4 61.36 temperature 15.0 270 > th dose independent rect. 11 5
6 61.50 precipitation 0.1 270 < th dose independent rect. 11 5
7 61.50 precipitation 0.1 270 < th dose dependent rect. 11 5
9 61.80 atmosphere 1015.0 270 < th dose independent rect. 11 5
10 61.80 temperature 10.0 270 > th dose independent rect. 16 19
11 62.11 wind 9.0 270 < th dose independent rect. 16 19
12 62.30 atmosphere 995.0 270 > th dose independent rect. 11 5
13 62.30 precipitation 0.1 270 < th dose independent rect. 16 19
14 62.30 precipitation 0.1 270 < th dose dependent rect. 16 19
15 62.57 humidity 50.0 270 > th dose independent rect. 16 19
21 63.14 precipitation 0.1 270 < th dose independent rect. 12 3
22 63.14 precipitation 0.1 270 < th dose dependent rect. 12 3
23 63.17 radiation 1.0 270 > th dose independent rect. 12 3
27 63.36 wind 9.0 270 < th dose independent rect. 12 3
28 63.46 atmosphere 1010.0 270 < th dose independent rect. 12 3
30 63.55 wind 9.0 270 < th dose independent rect. 23 17
31 63.58 temperature 10.0 270 > th dose independent rect. 12 3
34 63.58 temperature 10.0 270 > th dose independent rect. 15 21
35 63.62 radiation 40.0 270 < th dose independent rect. 17 18
39 63.70 atmosphere 995.0 270 > th dose independent rect. 12 3
42 63.78 wind 1.0 270 > th dose independent rect. 11 5
43 63.96 temperature 15.0 270 > th dose independent rect. 23 17
44 64.27 temperature 10.0 270 > th dose dependent rect. 11 5
45 64.28 temperature 10.0 270 > th dose independent rect. 16 7
46 64.28 radiation 40.0 270 < th dose independent rect. 16 7
51 64.30 precipitation 0.1 270 < th dose independent rect. 15 21
53 64.30 precipitation 0.1 270 < th dose dependent rect. 15 21
55 64.53 atmosphere 995.0 270 > th dose independent rect. 16 19
56 64.56 precipitation 0.1 270 < th dose independent rect. 23 17
57 64.56 precipitation 0.1 270 < th dose dependent rect. 23 17
58 64.57 wind 9.0 270 < th dose independent rect. 16 7
59 64.65 temperature 10.0 270 > th dose independent rect. 3 9
60 64.65 atmosphere 995.0 270 > th dose independent rect. 3 9
61 64.65 atmosphere 1015.0 270 < th dose independent rect. 3 9
62 64.65 precipitation 0.1 270 < th dose independent rect. 3 9
63 64.65 temperature 10.0 270 > th dose independent rect. 12 15
64 64.65 precipitation 0.1 270 < th dose dependent rect. 3 9
65 64.73 radiation 1.0 90 > th dose independent rect. 13 5
67 64.78 wind 9.0 270 < th dose independent rect. 12 15
68 64.78 wind 9.0 270 < th dose independent rect. 15 21
77 64.98 precipitation 0.1 270 < th dose independent rect. 16 7
78 64.98 precipitation 0.1 270 < th dose dependent rect. 16 7
79 65.00 atmosphere 995.0 270 > th dose independent rect. 23 17
80 65.01 temperature 10.0 270 > th dose dependent rect. 12 3
83 65.11 humidity 90.0 270 < th dose independent rect. 11 5
88 65.23 radiation 10.0 90 < th dose dependent rect. 17 8
89 65.24 atmosphere 1015.0 270 < th dose independent rect. 23 17
91 65.33 wind 1.0 270 > th dose independent rect. 16 19
94 65.49 wind 9.0 270 < th dose independent rect. 3 9
95 65.54 wind 1.0 270 > th dose independent rect. 16 7
98 65.59 wind 9.0 270 < th dose independent rect. 24 15
100 65.63 humidity 50.0 270 > th dose independent rect. 3 9
124 65.84 humidity 90.0 270 < th dose independent rect. 12 3
126 65.87 radiation 30.0 270 < th dose independent rect. 15 9
128 65.91 wind 1.0 270 > th dose independent rect. 12 3
150 66.32 humidity 50.0 90 > th dose independent rect. 17 8
155 66.37 temperature 10.0 270 > th dose independent rect. 15 9
158 66.38 atmosphere 1015.0 270 < th dose independent rect. 24 15
184 66.80 atmosphere 995.0 270 > th dose independent rect. 24 15
199 66.90 precipitation 0.1 270 < th dose independent rect. 12 15
200 66.90 precipitation 0.1 270 < th dose dependent rect. 12 15
229 67.38 atmosphere 995.0 270 > th dose dependent rect. 12 3
233 67.43 radiation 1.0 30 < th dose dependent sin 16 NA
234 67.46 temperature 10.0 90 > th dose dependent rect. 13 5
249 67.62 atmosphere 995.0 270 > th dose independent rect. 16 7
252 67.73 radiation 1.0 90 < th dose independent rect. 16 9
257 67.86 humidity 50.0 270 > th dose independent rect. 12 3
309 68.73 radiation 1.0 90 > th dose independent sin 17 NA
322 68.85 atmosphere 995.0 270 > th dose independent rect. 12 16
332 68.97 wind 9.0 270 < th dose dependent rect. 13 2
339 69.06 radiation 1.0 90 < th dose independent sin 17 NA
373 69.56 temperature 10.0 1440 > th dose independent rect. 14 5
377 69.56 temperature 10.0 1440 > th dose independent rect. 19 19
380 69.56 atmosphere 995.0 1440 > th dose independent rect. 19 19
398 69.68 atmosphere 1015.0 270 < th dose independent rect. 16 7
415 69.88 humidity 50.0 270 > th dose independent rect. 11 5
419 69.99 humidity 60.0 10 > th dose independent rect. 18 7
431 70.13 wind 9.0 270 < th dose dependent rect. 11 5
438 70.20 radiation 1.0 30 < th dose dependent rect. 6 19
439 70.21 humidity 50.0 10 > th dose independent rect. 18 19
466 70.34 humidity 90.0 10 < th dose independent rect. 13 5
547 70.74 temperature 30.0 10 < th dose independent rect. 18 7
632 71.37 wind 9.0 10 < th dose independent rect. 1 17
643 71.43 radiation 1.0 90 < th dose independent rect. 9 16
662 71.51 radiation 30.0 90 < th dose dependent sin 15 NA
740 71.87 wind 1.0 270 > th dose independent rect. 4 8
756 71.94 radiation 1.0 1440 < th dose dependent rect. 19 7
803 72.13 radiation 40.0 10 < th dose independent rect. 13 5
815 72.19 atmosphere 1015.0 270 < th dose independent rect. 16 19
823 72.23 precipitation 0.1 10 < th dose independent rect. 18 7
827 72.23 precipitation 0.1 10 < th dose dependent rect. 18 7
835 72.27 radiation 40.0 270 < th dose independent rect. 7 15
929 72.66 temperature 10.0 1440 > th dose independent rect. 19 7
932 72.66 temperature 30.0 1440 < th dose independent rect. 19 7
936 72.66 humidity 50.0 1440 > th dose independent rect. 19 7
938 72.66 atmosphere 995.0 1440 > th dose independent rect. 19 7
939 72.66 radiation 1.0 1440 < th dose independent rect. 19 7
959 72.66 temperature 10.0 1440 > th dose independent rect. 2 17
984 72.73 radiation 1.0 270 > th dose dependent rect. 12 3