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Os02g0593400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.03 (0.0194) R2 : 0.584
β1 : 1.5 (0.0708) R2dD : 0.424 R2D : 0.323
β2 : 0.568 (0.0472) R2dC : 0.133 R2C : 0.103
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.44 (0.0413) R2dN8 : 0.139 R2N8 : 0.0249
σ : 0.363
deviance : 60.24
__
_____
C
peak time of C : 21.7
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
53.38 0.343 7.02 1.37 0.638 0.46 0.405 1.38 0.466 22 68.34 1215 -- --
55.58 0.347 7.02 1.5 0.593 0.519 0.198 -- 0.489 22 66 1316 -- --
53.79 0.342 7.02 1.37 0.618 0.45 -- 1.25 0.463 22.1 66.01 1273 -- --
55.74 0.348 7.02 1.5 0.594 0.506 -- -- 0.495 22 65.99 1308 -- --
73.6 0.4 7 1.37 -- 0.494 -- 1.22 0.471 -- 72.04 1454 -- --
60.07 0.363 7.03 1.51 0.57 -- 0.217 -- 0.441 21.6 -- -- -- --
60.24 0.363 7.03 1.5 0.568 -- -- -- 0.44 21.7 -- -- -- --
74.51 0.402 7.01 1.49 -- 0.549 -- -- 0.496 -- 68.68 1498 -- --
109.82 0.488 7.05 -- 0.714 0.714 -- -- 0.381 21.7 82 2089 -- --
79.36 0.416 7.01 1.5 -- -- -- -- 0.439 -- -- -- -- --
119.35 0.511 7.07 -- 0.572 -- -- -- 0.274 21.9 -- -- -- --
129.92 0.531 7 -- -- 0.801 -- -- 0.428 -- 83 1511 -- --
138.9 0.55 7.05 -- -- -- -- -- 0.273 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 50.85 radiation 10.0 14400 < th dose dependent rect. 19 8
2 51.42 precipitation 0.1 14400 > th dose dependent rect. 17 1
3 51.93 humidity 90.0 720 < th dose dependent rect. 17 15
8 52.32 precipitation 0.1 14400 > th dose independent rect. 17 1
10 52.38 humidity 90.0 720 < th dose dependent sin 12 NA
13 52.45 atmosphere 1005.0 14400 > th dose independent rect. 11 2
18 52.53 humidity 80.0 1440 > th dose independent rect. 6 1
23 52.64 wind 9.0 4320 < th dose independent rect. 19 9
25 52.65 humidity 80.0 720 < th dose independent rect. 16 16
29 52.69 wind 3.0 43200 < th dose dependent rect. 23 6
34 52.72 atmosphere 1005.0 14400 < th dose independent rect. 12 1
45 52.86 wind 9.0 4320 < th dose independent rect. 19 6
47 52.87 temperature 20.0 270 > th dose independent rect. 5 18
48 52.87 humidity 90.0 1440 < th dose dependent rect. 6 1
59 52.93 temperature 20.0 30 > th dose dependent rect. 19 21
61 52.95 precipitation 0.1 14400 < th dose independent rect. 17 1
63 52.95 precipitation 0.1 14400 < th dose dependent rect. 17 1
64 52.96 humidity 80.0 720 < th dose independent rect. 16 10
70 52.99 humidity 80.0 720 < th dose independent rect. 19 4
71 53.00 humidity 80.0 720 < th dose independent sin 14 NA
77 53.02 humidity 80.0 720 < th dose dependent rect. 19 6
97 53.11 wind 9.0 4320 < th dose independent rect. 19 2
98 53.11 humidity 90.0 1440 < th dose dependent rect. 3 5
105 53.12 humidity 50.0 720 > th dose dependent rect. 18 3
107 53.13 humidity 80.0 720 < th dose independent rect. 18 7
117 53.15 humidity 80.0 720 < th dose dependent rect. 20 3
119 53.16 wind 7.0 4320 > th dose dependent rect. 20 8
125 53.17 humidity 80.0 1440 > th dose dependent rect. 2 15
141 53.21 wind 7.0 4320 > th dose independent rect. 20 8
180 53.30 precipitation 0.1 14400 > th dose dependent rect. 13 3
182 53.31 humidity 80.0 1440 < th dose independent rect. 21 18
183 53.31 humidity 50.0 720 > th dose dependent rect. 17 13
188 53.32 humidity 70.0 1440 > th dose dependent rect. 23 17
211 53.39 humidity 80.0 1440 > th dose independent rect. 21 19
221 53.40 temperature 10.0 90 > th dose dependent rect. 5 10
236 53.42 temperature 15.0 10 > th dose dependent rect. 6 20
237 53.42 temperature 10.0 90 > th dose dependent rect. 5 22
242 53.43 radiation 1.0 14400 < th dose dependent rect. 19 5
271 53.47 radiation 40.0 1440 > th dose dependent rect. 14 19
272 53.48 atmosphere 995.0 14400 > th dose independent rect. 18 1
281 53.49 wind 7.0 4320 > th dose independent rect. 20 1
287 53.50 humidity 80.0 720 < th dose independent rect. 10 22
296 53.52 humidity 80.0 1440 > th dose dependent sin 3 NA
298 53.53 wind 9.0 4320 > th dose independent rect. 20 4
302 53.53 wind 9.0 4320 > th dose dependent rect. 18 3
314 53.56 precipitation 0.1 14400 > th dose independent rect. 13 3
326 53.58 precipitation 0.1 14400 < th dose independent rect. 13 3
330 53.58 precipitation 0.1 14400 < th dose dependent rect. 13 3
331 53.58 humidity 50.0 720 > th dose dependent rect. 17 6
346 53.60 wind 7.0 4320 > th dose dependent rect. 20 4
355 53.61 radiation 40.0 1440 > th dose dependent rect. 14 1
371 53.63 humidity 70.0 720 > th dose independent rect. 18 12
399 53.64 humidity 60.0 720 > th dose dependent rect. 19 1
403 53.65 humidity 80.0 1440 < th dose independent rect. 6 1
419 53.66 humidity 80.0 1440 < th dose independent rect. 19 17
425 53.67 humidity 80.0 1440 < th dose independent sin 5 NA
428 53.67 humidity 80.0 720 > th dose independent rect. 3 19
437 53.68 atmosphere 1005.0 14400 > th dose independent rect. 6 8
440 53.68 wind 1.0 43200 > th dose dependent rect. 24 2
481 53.73 humidity 80.0 1440 < th dose independent rect. 21 15
502 53.75 humidity 70.0 720 > th dose independent rect. 18 2
563 53.81 humidity 80.0 1440 > th dose independent rect. 21 15
565 53.81 temperature 25.0 270 < th dose independent rect. 24 17
575 53.82 atmosphere 1005.0 14400 > th dose independent rect. 5 13
579 53.82 temperature 15.0 10 > th dose dependent rect. 6 18
580 53.82 humidity 70.0 720 > th dose dependent rect. 3 18
583 53.83 humidity 80.0 1440 > th dose independent sin 5 NA
590 53.83 atmosphere 995.0 14400 > th dose independent rect. 6 8
618 53.84 temperature 15.0 10 > th dose dependent rect. 6 10
659 53.88 humidity 70.0 1440 > th dose dependent rect. 5 3
664 53.89 atmosphere 995.0 14400 > th dose independent rect. 16 3
674 53.89 temperature 20.0 30 > th dose dependent rect. 19 19
679 53.90 humidity 80.0 14400 > th dose independent rect. 15 1
686 53.90 temperature 25.0 270 < th dose independent rect. 23 19
712 53.92 temperature 25.0 270 < th dose independent rect. 22 21
723 53.93 wind 9.0 4320 < th dose independent rect. 20 13
725 53.93 atmosphere 1005.0 14400 < th dose independent rect. 5 13
732 53.93 humidity 50.0 1440 > th dose dependent rect. 5 3
757 53.95 atmosphere 1005.0 14400 > th dose independent sin 1 NA
758 53.95 radiation 20.0 1440 > th dose independent rect. 6 1
759 53.95 wind 1.0 43200 < th dose independent rect. 1 2
767 53.95 atmosphere 995.0 14400 > th dose independent rect. 12 7
775 53.95 atmosphere 995.0 14400 > th dose independent rect. 9 10
831 53.98 wind 3.0 1440 > th dose independent rect. 7 2
873 54.00 atmosphere 995.0 14400 < th dose independent rect. 15 4
888 54.01 atmosphere 995.0 14400 < th dose independent rect. 18 1
900 54.01 atmosphere 995.0 14400 < th dose dependent rect. 18 1
910 54.02 atmosphere 995.0 14400 < th dose independent rect. 16 1
942 54.03 atmosphere 995.0 14400 < th dose dependent rect. 16 1
996 54.04 atmosphere 1000.0 4320 < th dose dependent rect. 10 3