Os02g0591600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : WD40-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
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Os02g0591600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : WD40-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52.65 | 0.341 | 8.47 | 0.000248 | 0.484 | 0.454 | -0.85 | -0.648 | -0.0743 | 5.48 | 90.08 | 839 | -- | -- |
| 53.61 | 0.341 | 8.46 | -0.0599 | 0.478 | 0.45 | -0.968 | -- | -0.0727 | 5.61 | 90.31 | 844 | -- | -- |
| 54.38 | 0.343 | 8.47 | 0.00854 | 0.479 | 0.462 | -- | -0.733 | -0.0698 | 5.3 | 90.28 | 836 | -- | -- |
| 55.86 | 0.348 | 8.46 | -0.0737 | 0.498 | 0.467 | -- | -- | -0.0807 | 5.36 | 90 | 899 | -- | -- |
| 58.13 | 0.355 | 8.47 | -0.0432 | -- | 0.734 | -- | -1.02 | -0.0396 | -- | 88.23 | 382 | -- | -- |
| 57.15 | 0.354 | 8.48 | -0.0128 | 0.548 | -- | -0.964 | -- | -0.166 | 6.25 | -- | -- | -- | -- |
| 59.44 | 0.361 | 8.48 | -0.0242 | 0.544 | -- | -- | -- | -0.163 | 6.17 | -- | -- | -- | -- |
| 60.17 | 0.361 | 8.47 | -0.108 | -- | 0.676 | -- | -- | -0.0556 | -- | 86.68 | 392 | -- | -- |
| 56.01 | 0.349 | 8.46 | -- | 0.495 | 0.451 | -- | -- | -0.0737 | 5.37 | 90 | 899 | -- | -- |
| 74.76 | 0.404 | 8.49 | -0.00908 | -- | -- | -- | -- | -0.151 | -- | -- | -- | -- | -- |
| 59.45 | 0.361 | 8.48 | -- | 0.543 | -- | -- | -- | -0.16 | 6.17 | -- | -- | -- | -- |
| 60.48 | 0.362 | 8.46 | -- | -- | 0.665 | -- | -- | -0.0455 | -- | 86.73 | 392 | -- | -- |
| 74.76 | 0.404 | 8.49 | -- | -- | -- | -- | -- | -0.15 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.71 | atmosphere | 1010 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 24 | 50.06 | atmosphere | 995 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 61 | 50.16 | humidity | 90 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 66 | 50.17 | atmosphere | 1010 | 14400 | < th | dose dependent | sin | 23 | NA |
| 74 | 50.18 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 4 | 14 |
| 86 | 50.20 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 3 | 16 |
| 94 | 50.21 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 5 | 14 |
| 100 | 50.22 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 6 | 12 |
| 129 | 50.24 | atmosphere | 1005 | 14400 | > th | dose independent | sin | 1 | NA |
| 139 | 50.25 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 8 | 5 |
| 150 | 50.25 | atmosphere | 1010 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 185 | 50.28 | atmosphere | 1005 | 14400 | < th | dose independent | sin | 1 | NA |
| 249 | 50.31 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 3 | 11 |
| 350 | 50.36 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 7 | 7 |
| 371 | 50.37 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 8 | 5 |
| 505 | 50.42 | atmosphere | 995 | 14400 | > th | dose dependent | sin | 23 | NA |
| 536 | 50.43 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 556 | 50.43 | atmosphere | 995 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 731 | 50.49 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 746 | 50.49 | atmosphere | 1010 | 14400 | < th | dose dependent | no | NA | NA |
| 774 | 50.50 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 16 | 22 |
| 803 | 50.50 | atmosphere | 1010 | 14400 | < th | dose dependent | rect. | 14 | 23 |
| 874 | 50.53 | atmosphere | 1005 | 14400 | < th | dose independent | no | NA | NA |
| 883 | 50.53 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 6 | 22 |
| 884 | 50.53 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 16 | 22 |
| 890 | 50.53 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 11 | 23 |
| 912 | 50.54 | atmosphere | 1005 | 14400 | > th | dose independent | no | NA | NA |
| 925 | 50.54 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 11 | 23 |
| 951 | 50.55 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 952 | 50.55 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 11 | 2 |