Os02g0590000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Lecithin:cholesterol acyltransferase family protein.
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Os02g0590000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Lecithin:cholesterol acyltransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 503.02 | 1.05 | 6.97 | -6.18 | 1.3 | 3.89 | 2.4 | -8.87 | -0.171 | 7.06 | 26.63 | 1051 | 7.73 | -- |
| 515.01 | 1.06 | 6.82 | -4.63 | 1.35 | 3.06 | 1.94 | -- | -0.0228 | 7.36 | 26.3 | 999 | 7.79 | -- |
| 517.73 | 1.06 | 6.98 | -6.18 | 1.29 | 3.97 | -- | -9.01 | -0.204 | 7.31 | 26.5 | 1041 | 7.68 | -- |
| 529.15 | 1.07 | 6.8 | -4.56 | 1.3 | 3.07 | -- | -- | 0.00231 | 7.31 | 26.3 | 990 | 7.41 | -- |
| 596.69 | 1.14 | 7.01 | -6.14 | -- | 4.05 | -- | -8.44 | -0.3 | -- | 26.09 | 1100 | 7.6 | -- |
| 817.98 | 1.34 | 6.81 | -3.85 | 1.65 | -- | 3.19 | -- | -0.093 | 5.54 | -- | -- | -- | -- |
| 843.04 | 1.36 | 6.82 | -3.84 | 1.67 | -- | -- | -- | -0.107 | 5.45 | -- | -- | -- | -- |
| 606.76 | 1.15 | 6.85 | -4.59 | -- | 3.28 | -- | -- | -0.113 | -- | 25.75 | 1063 | 7.37 | -- |
| 1050.74 | 1.51 | 6.69 | -- | 1.33 | 2.25 | -- | -- | 0.485 | 7.03 | 26.6 | 970 | 7.54 | -- |
| 988.05 | 1.47 | 6.84 | -3.78 | -- | -- | -- | -- | -0.0663 | -- | -- | -- | -- | -- |
| 1230.93 | 1.64 | 6.72 | -- | 1.61 | -- | -- | -- | 0.32 | 5.55 | -- | -- | -- | -- |
| 1135.1 | 1.57 | 6.72 | -- | -- | 2.45 | -- | -- | 0.469 | -- | 26.09 | 1010 | 6.8 | -- |
| 1365.08 | 1.72 | 6.74 | -- | -- | -- | -- | -- | 0.353 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 550.00 | humidity | 80 | 720 | < th | dose dependent | rect. | 18 | 3 |
| 2 | 550.49 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 8 |
| 3 | 551.09 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 15 |
| 5 | 552.01 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 2 |
| 18 | 552.48 | humidity | 80 | 720 | < th | dose dependent | rect. | 17 | 5 |
| 24 | 553.40 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 25 | 553.70 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 9 |
| 27 | 555.15 | humidity | 70 | 720 | > th | dose independent | sin | 12 | NA |
| 30 | 555.60 | temperature | 30 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 60 | 556.36 | temperature | 30 | 1440 | > th | dose dependent | sin | 13 | NA |
| 68 | 557.27 | temperature | 30 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 133 | 560.96 | humidity | 80 | 720 | < th | dose dependent | rect. | 17 | 15 |
| 161 | 562.73 | radiation | 30 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 208 | 563.90 | humidity | 70 | 720 | < th | dose independent | sin | 12 | NA |
| 294 | 566.97 | temperature | 30 | 1440 | > th | dose independent | sin | 13 | NA |
| 301 | 567.42 | temperature | 30 | 720 | > th | dose independent | rect. | 17 | 2 |
| 320 | 567.67 | temperature | 30 | 1440 | < th | dose independent | sin | 13 | NA |
| 373 | 568.60 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 3 |
| 376 | 568.67 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 5 |
| 466 | 570.16 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 666 | 572.13 | temperature | 30 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 673 | 572.60 | temperature | 30 | 1440 | > th | dose independent | rect. | 15 | 4 |
| 701 | 573.19 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 16 |
| 727 | 574.05 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 16 |
| 749 | 574.68 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 4 |
| 770 | 574.83 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 14 |
| 774 | 574.84 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 12 |
| 776 | 574.87 | radiation | 30 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 796 | 574.95 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 18 |
| 813 | 575.01 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 12 |
| 820 | 575.04 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 6 |
| 826 | 575.09 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 10 |
| 830 | 575.12 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 10 |
| 833 | 575.14 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 4 |
| 844 | 575.26 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 8 |
| 878 | 575.54 | radiation | 30 | 1440 | < th | dose independent | rect. | 22 | 10 |
| 882 | 575.57 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 18 |
| 902 | 575.62 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 22 |
| 911 | 575.70 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 912 | 575.70 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 16 |
| 918 | 575.77 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 14 |
| 927 | 575.93 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 936 | 576.01 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 20 |
| 939 | 576.08 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 14 |
| 940 | 576.10 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 8 |
| 998 | 576.72 | humidity | 80 | 1440 | < th | dose dependent | sin | 13 | NA |