Os02g0577900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0577900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 134.64 | 0.545 | 10.1 | 1.38 | 2.97 | -1.44 | -1.21 | 3.06 | -0.0244 | 22.6 | 24.73 | 10 | -- | -- |
| 138.38 | 0.552 | 10.2 | 1 | 2.99 | -1.15 | -1.5 | -- | -0.105 | 22.6 | 24.1 | 12 | -- | -- |
| 139.84 | 0.555 | 10.1 | 1.54 | 2.96 | -1.49 | -- | 3.95 | 0.027 | 22.6 | 24.37 | 9 | -- | -- |
| 147.56 | 0.569 | 10.2 | 1.05 | 3 | -1.13 | -- | -- | -0.111 | 22.7 | 24.2 | 7 | -- | -- |
| 612.72 | 1.16 | 9.92 | 2.19 | -- | -3.13 | -- | 4.06 | 0.449 | -- | 20 | 3 | -- | -- |
| 159.58 | 0.592 | 10.2 | 0.822 | 3.23 | -- | -1.31 | -- | -0.243 | 23.1 | -- | -- | -- | -- |
| 166.9 | 0.605 | 10.2 | 0.875 | 3.24 | -- | -- | -- | -0.239 | 23.1 | -- | -- | -- | -- |
| 625.75 | 1.17 | 9.99 | 1.58 | -- | -3.12 | -- | -- | 0.275 | -- | 17.9 | 2 | -- | -- |
| 175.39 | 0.62 | 10.2 | -- | 3.07 | -0.871 | -- | -- | -0.274 | 22.8 | 24.8 | 6 | -- | -- |
| 820.41 | 1.34 | 10.1 | 0.952 | -- | -- | -- | -- | -0.211 | -- | -- | -- | -- | -- |
| 187.09 | 0.64 | 10.2 | -- | 3.24 | -- | -- | -- | -0.336 | 23.1 | -- | -- | -- | -- |
| 686.02 | 1.22 | 10 | -- | -- | -2.54 | -- | -- | 0.0375 | -- | 20.56 | 2 | -- | -- |
| 844.31 | 1.36 | 10.1 | -- | -- | -- | -- | -- | -0.317 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 123.66 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 18 |
| 6 | 126.58 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 20 |
| 22 | 128.39 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 18 |
| 27 | 128.95 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 20 |
| 28 | 129.05 | temperature | 15 | 10 | > th | dose dependent | rect. | 5 | 19 |
| 30 | 129.06 | temperature | 15 | 10 | > th | dose dependent | rect. | 5 | 21 |
| 42 | 129.76 | temperature | 10 | 10 | > th | dose dependent | sin | 2 | NA |
| 51 | 130.13 | temperature | 30 | 270 | < th | dose independent | rect. | 24 | 17 |
| 57 | 130.34 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 9 |
| 82 | 131.06 | humidity | 60 | 10 | > th | dose dependent | rect. | 11 | 9 |
| 101 | 131.66 | temperature | 15 | 10 | > th | dose dependent | rect. | 5 | 10 |
| 102 | 131.68 | temperature | 30 | 90 | < th | dose independent | rect. | 2 | 17 |
| 103 | 131.68 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 17 |
| 115 | 131.87 | temperature | 30 | 10 | < th | dose dependent | sin | 0 | NA |
| 200 | 133.37 | temperature | 30 | 10 | < th | dose independent | rect. | 2 | 17 |
| 213 | 133.62 | temperature | 25 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 233 | 133.89 | humidity | 60 | 10 | > th | dose dependent | rect. | 24 | 20 |
| 264 | 134.22 | temperature | 30 | 10 | < th | dose dependent | rect. | 10 | 10 |
| 283 | 134.49 | humidity | 70 | 720 | > th | dose dependent | rect. | 7 | 6 |
| 290 | 134.53 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 8 |
| 312 | 134.65 | humidity | 70 | 10 | > th | dose dependent | rect. | 2 | 18 |
| 339 | 134.76 | humidity | 70 | 10 | > th | dose independent | rect. | 11 | 9 |
| 344 | 134.80 | temperature | 25 | 10 | > th | dose dependent | no | NA | NA |
| 347 | 134.82 | temperature | 30 | 10 | < th | dose independent | rect. | 11 | 9 |
| 353 | 134.87 | humidity | 80 | 720 | > th | dose independent | rect. | 7 | 5 |
| 378 | 135.12 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 13 |
| 383 | 135.17 | temperature | 30 | 10 | < th | dose independent | rect. | 24 | 20 |
| 402 | 135.33 | temperature | 25 | 10 | > th | dose dependent | rect. | 22 | 23 |
| 442 | 135.58 | temperature | 30 | 270 | < th | dose independent | rect. | 11 | 8 |
| 518 | 136.09 | humidity | 50 | 270 | > th | dose dependent | rect. | 23 | 20 |
| 640 | 136.72 | humidity | 70 | 10 | > th | dose independent | rect. | 24 | 20 |
| 645 | 136.73 | temperature | 25 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 650 | 136.76 | temperature | 20 | 10 | > th | dose dependent | rect. | 5 | 13 |
| 722 | 137.06 | humidity | 70 | 720 | > th | dose dependent | rect. | 9 | 2 |
| 728 | 137.09 | humidity | 80 | 10 | > th | dose independent | rect. | 2 | 18 |
| 747 | 137.16 | radiation | 40 | 14400 | < th | dose dependent | rect. | 3 | 2 |
| 756 | 137.19 | radiation | 1 | 270 | < th | dose dependent | rect. | 22 | 21 |
| 824 | 137.50 | humidity | 70 | 90 | > th | dose independent | rect. | 1 | 18 |
| 826 | 137.50 | humidity | 70 | 10 | > th | dose dependent | sin | 0 | NA |
| 836 | 137.53 | humidity | 80 | 10 | > th | dose independent | rect. | 2 | 16 |
| 877 | 137.69 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 5 |
| 893 | 137.73 | temperature | 25 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 906 | 137.79 | humidity | 70 | 90 | > th | dose independent | rect. | 10 | 9 |
| 915 | 137.83 | radiation | 10 | 4320 | < th | dose independent | rect. | 3 | 2 |
| 972 | 138.05 | radiation | 1 | 270 | < th | dose independent | rect. | 22 | 21 |