Os02g0566800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 31 protein.
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Os02g0566800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, family 31 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62.85 | 0.372 | 6.72 | 1.12 | 0.611 | -0.935 | 0.00845 | -0.478 | 0.719 | 8.51 | 25.7 | 124 | -- | -- |
| 62.92 | 0.369 | 6.71 | 1.17 | 0.612 | -0.98 | 0.013 | -- | 0.732 | 8.56 | 25.7 | 123 | -- | -- |
| 62.85 | 0.369 | 6.72 | 1.12 | 0.611 | -0.935 | -- | -0.485 | 0.719 | 8.52 | 25.7 | 123 | -- | -- |
| 62.92 | 0.369 | 6.71 | 1.17 | 0.61 | -0.98 | -- | -- | 0.732 | 8.56 | 25.7 | 123 | -- | -- |
| 74.1 | 0.401 | 6.72 | 1.18 | -- | -1.15 | -- | -0.109 | 0.809 | -- | 24.2 | 374 | -- | -- |
| 77.99 | 0.414 | 6.72 | 1.01 | 0.826 | -- | 0.322 | -- | 0.686 | 6.82 | -- | -- | -- | -- |
| 78.26 | 0.414 | 6.72 | 1.02 | 0.826 | -- | -- | -- | 0.685 | 6.84 | -- | -- | -- | -- |
| 73.97 | 0.401 | 6.71 | 1.24 | -- | -1.17 | -- | -- | 0.821 | -- | 24.16 | 379 | -- | -- |
| 97.43 | 0.46 | 6.75 | -- | 0.674 | -0.716 | -- | -- | 0.577 | 7.77 | 26.3 | 117 | -- | -- |
| 114.02 | 0.499 | 6.74 | 1.04 | -- | -- | -- | -- | 0.701 | -- | -- | -- | -- | -- |
| 105.62 | 0.481 | 6.74 | -- | 0.839 | -- | -- | -- | 0.572 | 6.76 | -- | -- | -- | -- |
| 113.06 | 0.495 | 6.75 | -- | -- | -0.995 | -- | -- | 0.652 | -- | 24.62 | 364 | -- | -- |
| 142.38 | 0.557 | 6.76 | -- | -- | -- | -- | -- | 0.586 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.93 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 11 |
| 3 | 60.22 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 18 |
| 15 | 61.07 | temperature | 15 | 720 | > th | dose dependent | rect. | 6 | 5 |
| 19 | 61.13 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 22 |
| 28 | 61.24 | temperature | 20 | 270 | > th | dose dependent | sin | 1 | NA |
| 53 | 61.68 | temperature | 25 | 720 | > th | dose independent | rect. | 8 | 1 |
| 54 | 61.68 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 7 |
| 62 | 61.81 | temperature | 20 | 720 | > th | dose dependent | rect. | 8 | 1 |
| 81 | 62.05 | temperature | 30 | 270 | < th | dose dependent | sin | 0 | NA |
| 83 | 62.08 | temperature | 25 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 101 | 62.26 | temperature | 20 | 90 | > th | dose dependent | rect. | 1 | 18 |
| 106 | 62.36 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 10 |
| 110 | 62.37 | temperature | 25 | 90 | > th | dose dependent | rect. | 8 | 16 |
| 123 | 62.46 | temperature | 20 | 270 | > th | dose dependent | rect. | 23 | 19 |
| 124 | 62.46 | temperature | 20 | 270 | > th | dose dependent | rect. | 22 | 21 |
| 142 | 62.55 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 14 |
| 196 | 62.83 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 7 |
| 210 | 62.88 | temperature | 10 | 720 | > th | dose dependent | rect. | 24 | 18 |
| 319 | 63.24 | temperature | 25 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 409 | 63.42 | temperature | 25 | 90 | > th | dose dependent | no | NA | NA |
| 485 | 63.57 | temperature | 25 | 270 | > th | dose dependent | rect. | 18 | 23 |
| 858 | 64.22 | temperature | 25 | 270 | > th | dose independent | rect. | 7 | 11 |