Os02g0564300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein MTH865 family protein.
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Os02g0564300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein MTH865 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 139.91 | 0.556 | 10.4 | 0.587 | 1.31 | 0.0499 | 0.176 | 11.2 | -0.85 | 9.07 | 28.5 | 715 | -- | -- |
| 146.61 | 0.564 | 10.5 | -0.594 | 1.36 | 1.37 | 0.0962 | -- | -0.852 | 8.75 | 29.7 | 659 | -- | -- |
| 139.97 | 0.551 | 10.5 | 0.573 | 1.31 | 0.0364 | -- | 11.2 | -0.859 | 9.05 | 28.66 | 712 | -- | -- |
| 145.53 | 0.562 | 10.6 | -0.587 | 1.39 | 1.29 | -- | -- | -0.921 | 8.84 | 29.33 | 685 | -- | -- |
| 219.15 | 0.689 | 10.4 | 1.26 | -- | -0.969 | -- | 13 | -0.764 | -- | 27.8 | 814 | -- | -- |
| 178.96 | 0.627 | 10.6 | -0.375 | 1.05 | -- | -0.559 | -- | -1.04 | 9.43 | -- | -- | -- | -- |
| 180.08 | 0.628 | 10.6 | -0.395 | 1.05 | -- | -- | -- | -1.04 | 9.51 | -- | -- | -- | -- |
| 216.71 | 0.686 | 10.6 | -0.633 | -- | 0.791 | -- | -- | -0.968 | -- | 29.15 | 5870 | -- | -- |
| 153.51 | 0.577 | 10.6 | -- | 1.33 | 1.2 | -- | -- | -0.872 | 8.96 | 29.88 | 667 | -- | -- |
| 245.31 | 0.732 | 10.6 | -0.402 | -- | -- | -- | -- | -1.03 | -- | -- | -- | -- | -- |
| 184.19 | 0.635 | 10.6 | -- | 1.05 | -- | -- | -- | -0.992 | 9.54 | -- | -- | -- | -- |
| 226.79 | 0.701 | 10.6 | -- | -- | 0.678 | -- | -- | -0.909 | -- | 29.37 | 5868 | -- | -- |
| 249.58 | 0.737 | 10.6 | -- | -- | -- | -- | -- | -0.988 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 138.36 | temperature | 30.0 | 720 | > th | dose independent | rect. | 10 | 7 |
| 34 | 139.30 | temperature | 30.0 | 720 | > th | dose independent | sin | 0 | NA |
| 61 | 140.16 | temperature | 30.0 | 720 | > th | dose independent | no | NA | NA |
| 62 | 140.16 | temperature | 30.0 | 720 | < th | dose independent | sin | 21 | NA |
| 168 | 140.19 | temperature | 30.0 | 720 | < th | dose independent | no | NA | NA |
| 169 | 140.24 | temperature | 30.0 | 720 | < th | dose independent | rect. | 7 | 16 |
| 171 | 140.34 | temperature | 30.0 | 720 | > th | dose independent | rect. | 15 | 23 |
| 190 | 140.60 | temperature | 30.0 | 720 | < th | dose independent | rect. | 16 | 23 |
| 193 | 140.67 | temperature | 30.0 | 720 | < th | dose independent | rect. | 3 | 23 |
| 194 | 140.76 | temperature | 30.0 | 720 | < th | dose independent | rect. | 1 | 23 |
| 196 | 140.82 | temperature | 30.0 | 720 | > th | dose independent | rect. | 12 | 23 |
| 200 | 140.87 | temperature | 30.0 | 720 | < th | dose independent | rect. | 6 | 23 |
| 224 | 141.23 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 10 | 7 |
| 279 | 141.58 | temperature | 30.0 | 720 | < th | dose independent | rect. | 11 | 9 |
| 280 | 141.59 | temperature | 30.0 | 720 | < th | dose independent | rect. | 9 | 12 |
| 286 | 141.73 | temperature | 30.0 | 720 | > th | dose dependent | sin | 2 | NA |
| 327 | 142.26 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 13 | 2 |
| 350 | 142.39 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 2 |
| 352 | 142.40 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 364 | 142.65 | temperature | 30.0 | 720 | < th | dose independent | rect. | 5 | 20 |
| 382 | 142.72 | temperature | 30.0 | 720 | > th | dose dependent | no | NA | NA |
| 543 | 143.31 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 13 | 23 |
| 569 | 143.59 | temperature | 30.0 | 720 | < th | dose independent | rect. | 22 | 23 |
| 576 | 143.70 | temperature | 30.0 | 720 | < th | dose independent | rect. | 7 | 11 |
| 595 | 144.11 | temperature | 30.0 | 720 | < th | dose independent | rect. | 12 | 6 |
| 599 | 144.19 | temperature | 30.0 | 720 | < th | dose independent | rect. | 9 | 19 |
| 602 | 144.20 | temperature | 30.0 | 720 | < th | dose independent | rect. | 24 | 18 |
| 651 | 144.48 | humidity | 60.0 | 720 | < th | dose independent | rect. | 11 | 4 |
| 669 | 144.63 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 671 | 144.65 | temperature | 30.0 | 720 | < th | dose independent | rect. | 22 | 20 |
| 693 | 144.88 | humidity | 60.0 | 720 | < th | dose independent | rect. | 11 | 6 |
| 735 | 145.30 | humidity | 60.0 | 720 | > th | dose independent | rect. | 11 | 6 |
| 768 | 145.47 | temperature | 30.0 | 720 | < th | dose independent | sin | 0 | NA |
| 773 | 145.53 | humidity | 60.0 | 720 | > th | dose independent | rect. | 11 | 8 |
| 916 | 146.12 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 1 | 6 |
| 952 | 146.33 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 24 | 8 |
| 962 | 146.39 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 963 | 146.39 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 966 | 146.40 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 983 | 146.49 | temperature | 30.0 | 720 | < th | dose independent | sin | 9 | NA |
| 984 | 146.49 | humidity | 60.0 | 720 | > th | dose independent | rect. | 11 | 17 |