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Os02g0564200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.6 (0.0155) R2 : 0.398
β1 : -0.95 (0.0567) R2dD : 0.384 R2D : 0.294
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.253 (0.0331) R2dN8 : 0.104 R2N8 : 0.0134
σ : 0.291
deviance : 38.72
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
22.66 0.224 12.6 -1.01 0.529 0.265 0.176 -0.17 -0.245 6.02 1000 20 -- --
22.66 0.223 12.6 -1 0.532 0.23 0.188 -- -0.245 6.01 1001 27 -- --
22.74 0.222 12.6 -1.01 0.53 0.266 -- -0.172 -0.246 6.02 1000 20 -- --
22.74 0.224 12.6 -0.999 0.53 0.233 -- -- -0.246 6.02 1000 17 -- --
37.29 0.284 12.6 -1.01 -- 0.244 -- -0.118 -0.232 -- 1000 20 -- --
24.36 0.231 12.6 -0.966 0.524 -- 0.162 -- -0.264 6.09 -- -- -- --
24.42 0.231 12.6 -0.965 0.525 -- -- -- -0.265 6.08 -- -- -- --
37.29 0.284 12.6 -0.985 -- 0.222 -- -- -0.236 -- 1000 20 -- --
48.36 0.324 12.6 -- 0.516 0.111 -- -- -0.138 6.15 1003 89 -- --
38.72 0.291 12.6 -0.95 -- -- -- -- -0.253 -- -- -- -- --
48.95 0.327 12.6 -- 0.511 -- -- -- -0.157 6.18 -- -- -- --
62.01 0.367 12.6 -- -- 0.1 -- -- -0.126 -- 1003 23 -- --
62.51 0.369 12.6 -- -- -- -- -- -0.148 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 20.92 temperature 25 30 > th dose independent rect. 7 1
3 21.88 atmosphere 1000 30 > th dose independent rect. 16 14
5 21.93 temperature 25 720 > th dose independent rect. 7 1
6 21.99 temperature 25 720 > th dose dependent rect. 7 1
7 22.02 temperature 25 270 < th dose independent rect. 22 9
8 22.06 humidity 90 270 > th dose dependent rect. 23 7
14 22.17 atmosphere 1000 30 > th dose independent rect. 16 16
20 22.22 temperature 25 10 > th dose dependent rect. 7 1
21 22.23 atmosphere 1000 270 > th dose independent rect. 14 16
27 22.26 temperature 25 90 > th dose independent rect. 19 12
28 22.26 atmosphere 1000 270 > th dose independent rect. 13 19
29 22.26 atmosphere 1000 270 > th dose independent rect. 12 21
32 22.29 humidity 80 14400 < th dose dependent rect. 1 1
33 22.29 humidity 80 14400 < th dose dependent rect. 3 1
34 22.29 humidity 80 14400 < th dose dependent rect. 1 3
38 22.30 atmosphere 1000 30 > th dose independent rect. 16 19
40 22.31 atmosphere 1000 90 > th dose independent rect. 3 16
45 22.32 humidity 90 270 > th dose dependent rect. 3 2
80 22.39 humidity 90 270 > th dose dependent sin 8 NA
87 22.40 atmosphere 1000 30 > th dose independent rect. 14 16
93 22.41 atmosphere 1000 10 > th dose independent rect. 17 23
103 22.42 humidity 90 270 > th dose dependent rect. 23 19
107 22.44 humidity 80 10 < th dose independent rect. 7 1
115 22.44 humidity 90 270 > th dose dependent rect. 23 16
131 22.47 atmosphere 1000 10 > th dose independent rect. 12 23
144 22.49 wind 9 14400 > th dose dependent rect. 13 1
168 22.50 humidity 90 270 > th dose dependent rect. 13 17
183 22.52 humidity 70 30 < th dose independent rect. 16 4
186 22.52 humidity 90 270 > th dose independent rect. 23 7
199 22.52 atmosphere 1000 30 > th dose independent rect. 14 21
202 22.52 wind 1 43200 < th dose dependent rect. 9 2
218 22.54 wind 9 14400 > th dose independent rect. 13 1
219 22.54 radiation 10 4320 < th dose independent rect. 13 1
229 22.54 atmosphere 1000 30 > th dose independent rect. 7 23
231 22.54 atmosphere 1000 270 > th dose dependent rect. 14 3
253 22.57 atmosphere 1000 10 > th dose independent rect. 14 19
260 22.58 atmosphere 1000 270 > th dose independent rect. 1 17
270 22.59 wind 9 14400 < th dose independent rect. 13 1
271 22.59 atmosphere 1000 30 > th dose independent rect. 16 3
274 22.59 atmosphere 995 270 > th dose dependent rect. 12 7
282 22.60 atmosphere 1000 270 > th dose independent rect. 22 21
291 22.61 humidity 80 14400 > th dose independent rect. 24 1
294 22.61 humidity 80 14400 > th dose independent rect. 22 8
304 22.62 humidity 80 14400 > th dose independent rect. 23 6
312 22.63 humidity 80 14400 < th dose independent rect. 3 1
313 22.63 humidity 80 14400 > th dose independent rect. 24 4
330 22.64 humidity 80 14400 < th dose independent rect. 23 5
337 22.64 radiation 10 30 > th dose independent rect. 16 16
340 22.64 radiation 20 4320 < th dose dependent rect. 13 1
351 22.65 humidity 80 14400 > th dose independent rect. 3 1
352 22.65 radiation 10 30 > th dose independent rect. 7 1
353 22.65 radiation 10 4320 > th dose independent rect. 13 1
376 22.66 radiation 20 4320 < th dose independent rect. 11 1
379 22.66 humidity 80 14400 < th dose independent rect. 23 3
412 22.68 radiation 20 4320 > th dose independent rect. 11 1
417 22.68 humidity 60 720 > th dose independent rect. 17 14
426 22.68 temperature 30 14400 > th dose dependent rect. 8 1
429 22.68 atmosphere 995 30 > th dose dependent rect. 16 3
477 22.70 atmosphere 1000 270 > th dose independent rect. 13 6
496 22.71 radiation 30 14400 < th dose independent rect. 17 3
526 22.72 atmosphere 1000 270 > th dose independent rect. 14 3
540 22.72 atmosphere 1000 30 > th dose independent rect. 3 23
603 22.75 atmosphere 1000 10 > th dose independent rect. 1 23
630 22.77 temperature 10 1440 > th dose independent rect. 17 3
633 22.77 radiation 30 1440 < th dose independent rect. 17 3
646 22.77 atmosphere 1000 30 > th dose independent rect. 12 18
647 22.77 temperature 10 1440 > th dose independent rect. 20 21
651 22.77 atmosphere 1000 10 > th dose independent rect. 14 23
661 22.78 humidity 50 1440 > th dose independent rect. 16 1
664 22.78 atmosphere 1005 270 > th dose independent rect. 14 1
678 22.78 atmosphere 1000 30 < th dose independent rect. 10 22
684 22.78 humidity 50 1440 < th dose dependent rect. 16 1
696 22.79 humidity 50 1440 < th dose independent rect. 16 1
697 22.79 atmosphere 1005 10 > th dose independent rect. 14 6
759 22.82 atmosphere 1000 270 > th dose independent rect. 12 9
761 22.82 temperature 30 270 > th dose independent rect. 16 22
764 22.82 humidity 90 270 > th dose dependent no NA NA
773 22.82 humidity 90 270 > th dose dependent rect. 17 22
793 22.83 temperature 20 30 > th dose dependent rect. 16 3
799 22.83 temperature 15 90 > th dose dependent rect. 19 8
812 22.84 radiation 20 270 > th dose independent rect. 16 1
838 22.84 atmosphere 1000 90 < th dose independent rect. 3 23
840 22.84 radiation 10 270 > th dose dependent rect. 16 2
849 22.84 atmosphere 1000 10 > th dose dependent rect. 14 6
867 22.85 atmosphere 1000 30 < th dose independent no NA NA
883 22.85 atmosphere 1000 10 > th dose independent rect. 23 23
884 22.85 atmosphere 1000 90 < th dose independent rect. 1 23
888 22.85 atmosphere 1000 30 < th dose independent rect. 7 23
891 22.85 atmosphere 1000 30 < th dose independent rect. 13 23
892 22.85 atmosphere 1000 30 < th dose independent rect. 15 23
904 22.85 temperature 10 30 > th dose dependent rect. 19 21
905 22.86 atmosphere 1000 10 > th dose independent no NA NA
912 22.86 radiation 10 4320 < th dose independent rect. 13 4
913 22.86 temperature 25 720 < th dose independent rect. 21 5
941 22.86 atmosphere 1000 30 < th dose independent rect. 17 23
942 22.86 atmosphere 1000 30 < th dose independent rect. 19 23
943 22.86 atmosphere 1000 30 < th dose independent rect. 21 23
944 22.86 atmosphere 1000 30 < th dose independent rect. 23 23
955 22.87 humidity 90 270 > th dose independent sin 9 NA
956 22.87 wind 1 14400 < th dose independent rect. 2 1
957 22.87 temperature 25 30 > th dose independent rect. 16 3
960 22.87 humidity 90 1440 < th dose independent rect. 24 3
985 22.87 atmosphere 1000 10 > th dose independent rect. 9 23
1000 22.88 humidity 50 1440 < th dose independent sin 11 NA