Os02g0558300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Molybdopterin converting factor, subunit 1 family protein.
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Os02g0558300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Molybdopterin converting factor, subunit 1 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.01 | 0.205 | 11.5 | -0.7 | 0.0831 | 0.365 | 0.697 | 0.207 | -0.187 | 10.5 | 21.25 | 4366 | -- | -- |
| 19.06 | 0.203 | 11.5 | -0.712 | 0.0757 | 0.37 | 0.701 | -- | -0.189 | 10.5 | 21.26 | 4366 | -- | -- |
| 20.9 | 0.213 | 11.5 | -0.674 | 0.0868 | 0.34 | -- | 0.365 | -0.183 | 8.55 | 20.93 | 4495 | -- | -- |
| 21.01 | 0.213 | 11.5 | -0.698 | 0.0844 | 0.372 | -- | -- | -0.188 | 9.32 | 21.26 | 4373 | -- | -- |
| 21.24 | 0.215 | 11.5 | -0.654 | -- | 0.368 | -- | 0.339 | -0.185 | -- | 21.04 | 4518 | -- | -- |
| 22.45 | 0.222 | 11.5 | -0.704 | 0.083 | -- | 0.69 | -- | -0.139 | 10.3 | -- | -- | -- | -- |
| 24.31 | 0.231 | 11.5 | -0.678 | 0.0873 | -- | -- | -- | -0.138 | 8.9 | -- | -- | -- | -- |
| 21.39 | 0.215 | 11.5 | -0.689 | -- | 0.362 | -- | -- | -0.188 | -- | 21.26 | 4496 | -- | -- |
| 31.5 | 0.261 | 11.5 | -- | 0.147 | 0.535 | -- | -- | -0.161 | 9.22 | 29.92 | 5548 | -- | -- |
| 24.75 | 0.232 | 11.5 | -0.678 | -- | -- | -- | -- | -0.137 | -- | -- | -- | -- | -- |
| 36.42 | 0.282 | 11.5 | -- | 0.0871 | -- | -- | -- | -0.0626 | 9.49 | -- | -- | -- | -- |
| 31.98 | 0.263 | 11.5 | -- | -- | 0.49 | -- | -- | -0.123 | -- | 30 | 5688 | -- | -- |
| 36.87 | 0.283 | 11.5 | -- | -- | -- | -- | -- | -0.0623 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.38 | radiation | 30 | 4320 | < th | dose dependent | rect. | 15 | 1 |
| 2 | 18.40 | radiation | 1 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 4 | 18.43 | radiation | 10 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 7 | 18.51 | radiation | 10 | 4320 | < th | dose independent | rect. | 15 | 3 |
| 8 | 18.51 | radiation | 10 | 4320 | < th | dose independent | rect. | 15 | 6 |
| 12 | 18.52 | radiation | 10 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 41 | 18.69 | radiation | 10 | 4320 | > th | dose independent | rect. | 15 | 3 |
| 81 | 18.70 | radiation | 40 | 4320 | < th | dose dependent | rect. | 15 | 8 |
| 82 | 18.70 | radiation | 40 | 4320 | < th | dose dependent | rect. | 15 | 14 |
| 92 | 18.71 | radiation | 30 | 4320 | < th | dose dependent | rect. | 15 | 4 |
| 136 | 18.74 | radiation | 20 | 4320 | > th | dose independent | sin | 14 | NA |
| 146 | 18.80 | temperature | 15 | 720 | > th | dose dependent | rect. | 11 | 5 |
| 147 | 18.80 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 9 |
| 162 | 18.81 | temperature | 30 | 720 | < th | dose dependent | rect. | 8 | 11 |
| 195 | 18.86 | radiation | 20 | 4320 | < th | dose independent | sin | 14 | NA |
| 253 | 18.91 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 6 |
| 274 | 18.93 | radiation | 30 | 4320 | < th | dose dependent | sin | 15 | NA |
| 409 | 19.01 | radiation | 20 | 4320 | > th | dose independent | rect. | 11 | 22 |
| 410 | 19.01 | temperature | 30 | 720 | < th | dose dependent | sin | 23 | NA |
| 447 | 19.05 | radiation | 20 | 4320 | > th | dose independent | rect. | 8 | 9 |
| 538 | 19.07 | radiation | 20 | 4320 | > th | dose independent | rect. | 15 | 23 |
| 643 | 19.13 | radiation | 20 | 4320 | > th | dose independent | no | NA | NA |
| 778 | 19.15 | radiation | 1 | 4320 | > th | dose dependent | sin | 14 | NA |
| 780 | 19.15 | temperature | 25 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 814 | 19.17 | temperature | 30 | 720 | < th | dose dependent | rect. | 13 | 2 |
| 820 | 19.17 | radiation | 30 | 4320 | < th | dose dependent | rect. | 8 | 11 |
| 955 | 19.22 | radiation | 20 | 4320 | < th | dose independent | rect. | 8 | 9 |
| 956 | 19.22 | radiation | 20 | 4320 | < th | dose independent | rect. | 15 | 21 |