Os02g0542500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0542500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 214.75 | 0.689 | 3.93 | -1.68 | 0.18 | 0.144 | 1.27 | 4.15 | 0.159 | 23.4 | 1005 | 16877 | -- | -- |
| 232.97 | 0.711 | 3.85 | -1.14 | 0.152 | 0.456 | 1.3 | -- | 0.226 | 23.3 | 1003 | 13269 | -- | -- |
| 220.04 | 0.691 | 3.94 | -1.79 | 0.171 | 0.227 | -- | 4.39 | 0.139 | 23.4 | 1006 | 17112 | -- | -- |
| 234.9 | 0.714 | 3.89 | -1.24 | 0.152 | 0.641 | -- | -- | 0.171 | 23.3 | 999.2 | 10629 | -- | -- |
| 221.86 | 0.694 | 3.93 | -1.78 | -- | 0.231 | -- | 4.39 | 0.139 | -- | 1006 | 17112 | -- | -- |
| 237.25 | 0.722 | 3.88 | -1.31 | 0.17 | -- | 1.23 | -- | 0.225 | 23.4 | -- | -- | -- | -- |
| 243.76 | 0.731 | 3.88 | -1.36 | 0.165 | -- | -- | -- | 0.221 | 23.1 | -- | -- | -- | -- |
| 236.38 | 0.716 | 3.89 | -1.23 | -- | 0.64 | -- | -- | 0.166 | -- | 999.2 | 11085 | -- | -- |
| 273.24 | 0.77 | 3.87 | -- | 0.155 | 0.913 | -- | -- | 0.268 | 22.4 | 999.1 | 11085 | -- | -- |
| 245.46 | 0.732 | 3.88 | -1.36 | -- | -- | -- | -- | 0.222 | -- | -- | -- | -- | -- |
| 292.69 | 0.8 | 3.85 | -- | 0.155 | -- | -- | -- | 0.372 | 22.5 | -- | -- | -- | -- |
| 274.66 | 0.772 | 3.87 | -- | -- | 0.914 | -- | -- | 0.272 | -- | 999.1 | 11127 | -- | -- |
| 294.16 | 0.801 | 3.84 | -- | -- | -- | -- | -- | 0.373 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 212.97 | atmosphere | 1005 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 3 | 213.48 | atmosphere | 1005 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 7 | 214.59 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 12 | 215.40 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 61 | 217.29 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 82 | 217.55 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 96 | 217.67 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 112 | 217.80 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 1 | 3 |
| 122 | 217.85 | wind | 5 | 4320 | > th | dose dependent | rect. | 20 | 6 |
| 210 | 218.41 | atmosphere | 1005 | 4320 | < th | dose dependent | rect. | 23 | 2 |
| 231 | 218.56 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 9 | 4 |
| 308 | 219.01 | atmosphere | 1005 | 14400 | < th | dose independent | sin | 11 | NA |
| 322 | 219.08 | atmosphere | 1005 | 14400 | > th | dose independent | sin | 11 | NA |
| 336 | 219.15 | wind | 5 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 400 | 219.43 | wind | 5 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 444 | 219.58 | wind | 5 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 453 | 219.61 | humidity | 70 | 1440 | > th | dose dependent | rect. | 2 | 10 |
| 460 | 219.64 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 572 | 219.95 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 5 | 11 |
| 599 | 220.02 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 5 | 11 |
| 621 | 220.07 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 5 | 16 |
| 624 | 220.08 | atmosphere | 995 | 14400 | > th | dose independent | sin | 0 | NA |
| 647 | 220.09 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 5 | 12 |
| 651 | 220.10 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 13 | 10 |
| 659 | 220.11 | atmosphere | 995 | 14400 | < th | dose independent | sin | 0 | NA |
| 674 | 220.13 | atmosphere | 995 | 14400 | > th | dose independent | sin | 20 | NA |
| 694 | 220.16 | atmosphere | 995 | 14400 | < th | dose independent | sin | 20 | NA |
| 703 | 220.16 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 5 | 17 |
| 708 | 220.17 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 15 | 7 |
| 709 | 220.17 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 14 | 9 |
| 730 | 220.19 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 4 | 15 |
| 759 | 220.23 | atmosphere | 995 | 14400 | < th | dose dependent | sin | 22 | NA |
| 916 | 220.40 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 14 | 9 |
| 944 | 220.42 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 15 | 7 |