Os02g0536100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0536100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 146.95 | 0.57 | 5.91 | -0.851 | 0.356 | -2.44 | -0.807 | 1.57 | -0.43 | 6.18 | 24.9 | 1356 | -- | -- |
| 149.23 | 0.569 | 5.87 | -0.573 | 0.355 | -2.59 | -0.855 | -- | -0.356 | 6.19 | 24.44 | 1324 | -- | -- |
| 148.46 | 0.567 | 5.91 | -0.878 | 0.353 | -2.43 | -- | 1.67 | -0.432 | 5.9 | 24.9 | 1340 | -- | -- |
| 151.08 | 0.572 | 5.87 | -0.592 | 0.357 | -2.63 | -- | -- | -0.356 | 5.9 | 24.33 | 1338 | -- | -- |
| 154.84 | 0.58 | 5.92 | -0.882 | -- | -2.46 | -- | 1.68 | -0.436 | -- | 25.03 | 1328 | -- | -- |
| 238.87 | 0.725 | 5.75 | 0.194 | 0.452 | -- | -0.98 | -- | 0.162 | 5.49 | -- | -- | -- | -- |
| 241.09 | 0.727 | 5.75 | 0.189 | 0.447 | -- | -- | -- | 0.166 | 5.07 | -- | -- | -- | -- |
| 157.65 | 0.585 | 5.88 | -0.59 | -- | -2.65 | -- | -- | -0.366 | -- | 24.6 | 1333 | -- | -- |
| 158.98 | 0.587 | 5.85 | -- | 0.364 | -2.32 | -- | -- | -0.263 | 5.72 | 24.3 | 1304 | -- | -- |
| 251.58 | 0.741 | 5.76 | 0.205 | -- | -- | -- | -- | 0.177 | -- | -- | -- | -- | -- |
| 242.03 | 0.728 | 5.76 | -- | 0.451 | -- | -- | -- | 0.145 | 5.05 | -- | -- | -- | -- |
| 165.4 | 0.599 | 5.85 | -- | -- | -2.34 | -- | -- | -0.251 | -- | 24.7 | 1306 | -- | -- |
| 252.69 | 0.742 | 5.76 | -- | -- | -- | -- | -- | 0.155 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 144.24 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 3 | 144.59 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 11 |
| 10 | 144.87 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 137 | 146.70 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 14 |
| 232 | 147.37 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 233 | 147.40 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 239 | 147.42 | temperature | 10 | 1440 | > th | dose dependent | sin | 12 | NA |
| 266 | 147.54 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 298 | 147.72 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 320 | 147.79 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 379 | 148.10 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 429 | 148.33 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 521 | 148.83 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 6 |
| 592 | 149.15 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 6 |
| 725 | 149.63 | temperature | 15 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 735 | 149.66 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 736 | 149.67 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 855 | 150.16 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 869 | 150.22 | temperature | 25 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 897 | 150.30 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 910 | 150.34 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 988 | 150.55 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |