Os02g0534000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0534000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46.19 | 0.319 | 9.29 | 0.324 | 0.296 | 0.586 | 0.561 | -1.39 | -0.319 | 22.2 | 21.43 | 1221 | -- | -- |
| 47.57 | 0.321 | 9.25 | 0.719 | 0.276 | 0.513 | 0.431 | -- | -0.21 | 22.3 | 20.86 | 1126 | -- | -- |
| 47.25 | 0.32 | 9.31 | 0.229 | 0.305 | 0.613 | -- | -1.72 | -0.334 | 22.6 | 23.08 | 1266 | -- | -- |
| 48.1 | 0.323 | 9.24 | 0.712 | 0.224 | 0.55 | -- | -- | -0.204 | 23.6 | 21.36 | 912 | -- | -- |
| 50.03 | 0.329 | 9.28 | 0.344 | -- | 0.766 | -- | -1.43 | -0.302 | -- | 22.71 | 933 | -- | -- |
| 54.94 | 0.347 | 9.22 | 0.887 | 0.363 | -- | 0.45 | -- | -0.0975 | 22.9 | -- | -- | -- | -- |
| 55.76 | 0.35 | 9.22 | 0.868 | 0.361 | -- | -- | -- | -0.0996 | 23.1 | -- | -- | -- | -- |
| 50.8 | 0.332 | 9.24 | 0.676 | -- | 0.682 | -- | -- | -0.225 | -- | 21.26 | 893 | -- | -- |
| 58.25 | 0.355 | 9.27 | -- | 0.309 | 0.933 | -- | -- | -0.338 | 23.8 | 13.1 | 1951 | -- | -- |
| 63.88 | 0.373 | 9.21 | 0.876 | -- | -- | -- | -- | -0.0966 | -- | -- | -- | -- | -- |
| 75.61 | 0.407 | 9.24 | -- | 0.369 | -- | -- | -- | -0.196 | 23.3 | -- | -- | -- | -- |
| 59.6 | 0.36 | 9.29 | -- | -- | 1.02 | -- | -- | -0.428 | -- | 6.401 | 8145 | -- | -- |
| 84.13 | 0.428 | 9.24 | -- | -- | -- | -- | -- | -0.194 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 44.38 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 13 | 44.50 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 13 | 16 |
| 14 | 44.72 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 17 | 22 |
| 17 | 44.82 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 3 | 13 |
| 33 | 45.09 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 38 | 45.11 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 41 | 45.14 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 42 | 45.14 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 44 | 45.18 | wind | 7.0 | 14400 | > th | dose independent | rect. | 23 | 17 |
| 51 | 45.21 | wind | 7.0 | 14400 | < th | dose independent | rect. | 23 | 17 |
| 52 | 45.22 | humidity | 70.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 55 | 45.22 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 20 | 19 |
| 57 | 45.23 | wind | 9.0 | 14400 | < th | dose independent | rect. | 18 | 21 |
| 64 | 45.27 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 74 | 45.30 | wind | 9.0 | 14400 | > th | dose independent | rect. | 18 | 21 |
| 76 | 45.31 | wind | 5.0 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 118 | 45.42 | wind | 5.0 | 14400 | > th | dose dependent | sin | 2 | NA |
| 120 | 45.43 | wind | 5.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 154 | 45.52 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 20 | 9 |
| 159 | 45.55 | wind | 5.0 | 14400 | > th | dose independent | rect. | 8 | 8 |
| 167 | 45.55 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 13 | 22 |
| 177 | 45.59 | wind | 5.0 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 190 | 45.61 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 211 | 45.66 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 2 |
| 228 | 45.69 | wind | 5.0 | 14400 | < th | dose independent | rect. | 8 | 8 |
| 258 | 45.73 | wind | 5.0 | 14400 | > th | dose independent | sin | 2 | NA |
| 312 | 45.80 | wind | 7.0 | 14400 | > th | dose independent | sin | 4 | NA |
| 318 | 45.80 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 13 | 19 |
| 330 | 45.81 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 13 | 17 |
| 333 | 45.82 | wind | 5.0 | 14400 | < th | dose independent | sin | 2 | NA |
| 337 | 45.82 | temperature | 20.0 | 720 | > th | dose dependent | sin | 17 | NA |
| 391 | 45.88 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 15 | 15 |
| 418 | 45.93 | wind | 3.0 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 429 | 45.94 | temperature | 20.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 441 | 45.95 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 13 | 12 |
| 447 | 45.96 | wind | 3.0 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 452 | 45.96 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 482 | 45.99 | wind | 7.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 492 | 46.00 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 16 |
| 497 | 46.00 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 509 | 46.02 | wind | 3.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 512 | 46.02 | wind | 5.0 | 43200 | > th | dose independent | rect. | 13 | 10 |
| 553 | 46.06 | wind | 5.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 587 | 46.09 | wind | 1.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 600 | 46.10 | wind | 5.0 | 43200 | < th | dose independent | rect. | 13 | 10 |
| 611 | 46.11 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 620 | 46.11 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 14 |
| 624 | 46.12 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 629 | 46.12 | wind | 9.0 | 14400 | > th | dose dependent | sin | 16 | NA |
| 631 | 46.12 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 635 | 46.12 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 22 | 23 |
| 665 | 46.15 | wind | 5.0 | 43200 | > th | dose independent | rect. | 13 | 15 |
| 672 | 46.16 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 687 | 46.16 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 703 | 46.16 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 16 | 19 |
| 712 | 46.17 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 3 | 22 |
| 718 | 46.18 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 16 | 19 |
| 719 | 46.18 | wind | 9.0 | 14400 | > th | dose dependent | sin | 7 | NA |
| 733 | 46.19 | wind | 5.0 | 43200 | < th | dose independent | rect. | 13 | 15 |
| 801 | 46.21 | wind | 9.0 | 14400 | > th | dose dependent | no | NA | NA |
| 807 | 46.21 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 7 | 17 |
| 811 | 46.21 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 9 | 21 |
| 823 | 46.22 | wind | 3.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 824 | 46.22 | wind | 5.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 829 | 46.22 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 16 | 9 |
| 831 | 46.22 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 16 | 11 |
| 833 | 46.22 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 845 | 46.23 | humidity | 60.0 | 270 | > th | dose independent | rect. | 16 | 9 |
| 871 | 46.24 | wind | 9.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 899 | 46.25 | wind | 5.0 | 43200 | > th | dose independent | sin | 19 | NA |
| 910 | 46.25 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 16 | 18 |
| 961 | 46.27 | wind | 5.0 | 43200 | < th | dose independent | sin | 19 | NA |
| 975 | 46.27 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 19 | 8 |