Os02g0524600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : WD40-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
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Os02g0524600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : WD40-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.12 | 0.266 | 11.9 | 2.18 | 0.845 | 0.85 | 0.36 | -1.26 | 0.657 | 18.8 | 80 | 2825 | -- | -- |
| 33.01 | 0.268 | 11.9 | 2.07 | 0.849 | 0.718 | 0.391 | -- | 0.638 | 18.7 | 82 | 2855 | -- | -- |
| 32.06 | 0.264 | 11.9 | 2.14 | 0.849 | 0.796 | -- | -1.02 | 0.648 | 19 | 81 | 2746 | -- | -- |
| 33.2 | 0.268 | 11.9 | 2.04 | 0.848 | 0.697 | -- | -- | 0.635 | 18.8 | 81.44 | 2800 | -- | -- |
| 69.36 | 0.388 | 11.9 | 2.15 | -- | 0.973 | -- | -1.39 | 0.673 | -- | 81.35 | 2796 | -- | -- |
| 39.38 | 0.294 | 11.9 | 2.08 | 0.872 | -- | 0.376 | -- | 0.548 | 18.7 | -- | -- | -- | -- |
| 39.74 | 0.295 | 11.9 | 2.08 | 0.873 | -- | -- | -- | 0.549 | 18.7 | -- | -- | -- | -- |
| 70.74 | 0.392 | 11.9 | 2.02 | -- | 0.794 | -- | -- | 0.631 | -- | 81.63 | 2779 | -- | -- |
| 139.57 | 0.55 | 11.9 | -- | 0.845 | 0.868 | -- | -- | 0.507 | 19 | 81.98 | 27239 | -- | -- |
| 79.55 | 0.417 | 11.9 | 2.06 | -- | -- | -- | -- | 0.531 | -- | -- | -- | -- | -- |
| 153.44 | 0.579 | 12 | -- | 0.848 | -- | -- | -- | 0.317 | 18.8 | -- | -- | -- | -- |
| 108.99 | 0.486 | 12 | -- | -- | 1.8 | -- | -- | 0.219 | -- | 64.72 | 47520 | -- | -- |
| 191.14 | 0.645 | 12 | -- | -- | -- | -- | -- | 0.303 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.17 | humidity | 70 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 2 | 31.53 | humidity | 70 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 3 | 31.91 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 3 |
| 15 | 32.29 | humidity | 70 | 1440 | > th | dose independent | rect. | 14 | 12 |
| 16 | 32.29 | humidity | 70 | 1440 | > th | dose independent | rect. | 14 | 14 |
| 19 | 32.29 | humidity | 70 | 1440 | > th | dose independent | rect. | 14 | 19 |
| 45 | 32.44 | humidity | 80 | 4320 | < th | dose dependent | rect. | 19 | 6 |
| 65 | 32.58 | humidity | 80 | 1440 | > th | dose independent | rect. | 18 | 3 |
| 66 | 32.58 | humidity | 80 | 4320 | < th | dose dependent | rect. | 20 | 3 |
| 68 | 32.61 | humidity | 70 | 1440 | > th | dose independent | sin | 14 | NA |
| 72 | 32.65 | humidity | 80 | 1440 | < th | dose independent | rect. | 18 | 2 |
| 95 | 32.77 | humidity | 80 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 133 | 32.95 | humidity | 80 | 1440 | > th | dose independent | rect. | 10 | 14 |
| 138 | 32.99 | wind | 1 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 141 | 33.00 | humidity | 80 | 4320 | < th | dose independent | rect. | 18 | 7 |
| 151 | 33.02 | humidity | 80 | 1440 | > th | dose independent | rect. | 10 | 12 |
| 165 | 33.07 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 3 |
| 169 | 33.07 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 10 |
| 174 | 33.09 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 3 |
| 203 | 33.14 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 223 | 33.17 | humidity | 80 | 1440 | < th | dose independent | rect. | 10 | 11 |
| 225 | 33.17 | humidity | 60 | 1440 | > th | dose dependent | sin | 16 | NA |
| 230 | 33.18 | humidity | 70 | 1440 | > th | dose dependent | sin | 18 | NA |
| 237 | 33.19 | humidity | 60 | 1440 | > th | dose dependent | rect. | 12 | 16 |
| 245 | 33.20 | humidity | 60 | 1440 | > th | dose dependent | rect. | 13 | 14 |
| 282 | 33.23 | humidity | 70 | 1440 | < th | dose independent | rect. | 14 | 19 |
| 289 | 33.24 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 325 | 33.26 | humidity | 80 | 4320 | > th | dose independent | rect. | 18 | 7 |
| 363 | 33.29 | humidity | 80 | 1440 | < th | dose independent | sin | 18 | NA |
| 372 | 33.30 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 389 | 33.32 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 448 | 33.37 | humidity | 80 | 1440 | > th | dose independent | rect. | 18 | 22 |
| 485 | 33.39 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 5 |
| 564 | 33.45 | wind | 1 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 609 | 33.47 | humidity | 80 | 4320 | < th | dose dependent | rect. | 15 | 12 |
| 615 | 33.48 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 7 |
| 644 | 33.49 | humidity | 80 | 4320 | < th | dose dependent | sin | 13 | NA |
| 684 | 33.52 | wind | 1 | 4320 | < th | dose independent | rect. | 4 | 1 |
| 724 | 33.53 | humidity | 80 | 1440 | > th | dose independent | rect. | 23 | 23 |
| 732 | 33.54 | humidity | 80 | 1440 | > th | dose independent | no | NA | NA |
| 741 | 33.54 | temperature | 25 | 4320 | > th | dose dependent | rect. | 22 | 1 |
| 742 | 33.54 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 7 |
| 756 | 33.55 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 9 |
| 765 | 33.56 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 7 |
| 787 | 33.57 | humidity | 90 | 1440 | < th | dose dependent | rect. | 15 | 6 |
| 844 | 33.59 | humidity | 70 | 1440 | > th | dose dependent | rect. | 1 | 20 |
| 871 | 33.61 | humidity | 80 | 1440 | < th | dose independent | rect. | 10 | 22 |
| 931 | 33.63 | humidity | 70 | 1440 | > th | dose dependent | rect. | 3 | 18 |
| 963 | 33.65 | humidity | 70 | 1440 | > th | dose dependent | rect. | 5 | 16 |
| 980 | 33.66 | radiation | 1 | 43200 | < th | dose dependent | rect. | 1 | 1 |