Os02g0524500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, RING-type domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0524500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Zinc finger, RING-type domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 105.73 | 0.483 | 7.67 | -2.38 | 1.31 | 1.29 | 0.769 | -3.14 | -0.266 | 0.429 | 9.622 | 1301 | -- | -- |
| 113.8 | 0.497 | 7.58 | -1.68 | 1.25 | 1.28 | 0.719 | -- | -0.0851 | 0.405 | 6.268 | 1201 | -- | -- |
| 108.07 | 0.484 | 7.67 | -2.38 | 1.33 | 1.27 | -- | -2.95 | -0.263 | 0.488 | 9.384 | 1367 | -- | -- |
| 114.85 | 0.499 | 7.59 | -1.73 | 1.23 | 1.3 | -- | -- | -0.0904 | 0.592 | 5.67 | 1142 | -- | -- |
| 210.26 | 0.675 | 7.67 | -2.5 | -- | 1.55 | -- | -2.44 | -0.32 | -- | 8.979 | 2422 | -- | -- |
| 139.91 | 0.555 | 7.54 | -1.32 | 1.4 | -- | 0.606 | -- | 0.139 | 0.551 | -- | -- | -- | -- |
| 141.47 | 0.557 | 7.54 | -1.34 | 1.4 | -- | -- | -- | 0.135 | 0.602 | -- | -- | -- | -- |
| 194.21 | 0.649 | 7.59 | -1.88 | -- | 2.08 | -- | -- | -0.182 | -- | 8.464 | 953 | -- | -- |
| 181.48 | 0.627 | 7.52 | -- | 1.36 | 0.695 | -- | -- | 0.206 | 1.01 | 10.76 | 533 | -- | -- |
| 264.63 | 0.76 | 7.51 | -1.29 | -- | -- | -- | -- | 0.16 | -- | -- | -- | -- | -- |
| 189.04 | 0.643 | 7.5 | -- | 1.38 | -- | -- | -- | 0.285 | 0.555 | -- | -- | -- | -- |
| 276.66 | 0.775 | 7.52 | -- | -- | 1.33 | -- | -- | 0.129 | -- | 11.72 | 921 | -- | -- |
| 308.8 | 0.82 | 7.48 | -- | -- | -- | -- | -- | 0.303 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 96.73 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 16 |
| 2 | 96.87 | temperature | 10 | 270 | > th | dose dependent | rect. | 13 | 20 |
| 4 | 97.28 | temperature | 10 | 270 | > th | dose dependent | rect. | 14 | 18 |
| 5 | 97.40 | radiation | 1 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 16 | 99.46 | temperature | 20 | 90 | > th | dose independent | rect. | 3 | 17 |
| 17 | 99.50 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 27 | 99.90 | radiation | 1 | 270 | < th | dose independent | rect. | 5 | 22 |
| 66 | 101.13 | temperature | 15 | 270 | > th | dose dependent | rect. | 14 | 5 |
| 69 | 101.21 | radiation | 1 | 270 | < th | dose dependent | sin | 14 | NA |
| 88 | 101.45 | temperature | 15 | 90 | > th | dose dependent | rect. | 16 | 17 |
| 110 | 101.78 | radiation | 1 | 270 | < th | dose independent | sin | 14 | NA |
| 140 | 102.20 | temperature | 10 | 270 | > th | dose dependent | rect. | 24 | 9 |
| 170 | 102.62 | temperature | 10 | 43200 | > th | dose independent | rect. | 9 | 8 |
| 178 | 102.68 | temperature | 15 | 270 | > th | dose dependent | rect. | 13 | 7 |
| 188 | 102.76 | radiation | 1 | 270 | > th | dose independent | sin | 14 | NA |
| 201 | 102.87 | temperature | 10 | 1440 | > th | dose dependent | sin | 20 | NA |
| 225 | 103.02 | humidity | 50 | 43200 | > th | dose independent | rect. | 22 | 6 |
| 230 | 103.06 | humidity | 80 | 43200 | > th | dose independent | rect. | 22 | 3 |
| 231 | 103.06 | radiation | 30 | 14400 | < th | dose dependent | rect. | 21 | 8 |
| 259 | 103.26 | temperature | 15 | 270 | > th | dose dependent | rect. | 15 | 3 |
| 281 | 103.38 | radiation | 30 | 4320 | < th | dose independent | rect. | 23 | 9 |
| 310 | 103.56 | humidity | 80 | 43200 | < th | dose independent | rect. | 22 | 2 |
| 352 | 103.81 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 3 |
| 387 | 104.00 | humidity | 80 | 43200 | > th | dose independent | rect. | 22 | 6 |
| 412 | 104.09 | humidity | 80 | 43200 | < th | dose dependent | rect. | 22 | 8 |
| 428 | 104.14 | humidity | 80 | 43200 | < th | dose independent | rect. | 22 | 7 |
| 435 | 104.17 | radiation | 30 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 477 | 104.34 | radiation | 10 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 490 | 104.36 | radiation | 1 | 270 | > th | dose independent | rect. | 15 | 15 |
| 496 | 104.39 | humidity | 80 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 510 | 104.46 | humidity | 80 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 579 | 104.69 | wind | 3 | 43200 | > th | dose dependent | rect. | 15 | 16 |
| 604 | 104.77 | humidity | 80 | 43200 | < th | dose dependent | rect. | 3 | 3 |
| 611 | 104.81 | temperature | 20 | 270 | > th | dose independent | rect. | 14 | 5 |
| 635 | 104.90 | humidity | 80 | 43200 | > th | dose independent | rect. | 3 | 2 |
| 657 | 104.98 | humidity | 80 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 672 | 105.02 | humidity | 60 | 14400 | < th | dose dependent | rect. | 17 | 16 |
| 752 | 105.27 | wind | 3 | 270 | > th | dose independent | rect. | 13 | 6 |
| 771 | 105.32 | wind | 9 | 43200 | < th | dose dependent | rect. | 14 | 20 |
| 810 | 105.42 | wind | 1 | 43200 | > th | dose dependent | rect. | 24 | 21 |
| 816 | 105.43 | wind | 9 | 43200 | < th | dose dependent | rect. | 14 | 17 |
| 871 | 105.54 | wind | 1 | 43200 | > th | dose dependent | rect. | 24 | 19 |
| 882 | 105.55 | wind | 9 | 43200 | < th | dose dependent | rect. | 24 | 21 |
| 884 | 105.55 | wind | 1 | 43200 | > th | dose dependent | rect. | 9 | 23 |
| 942 | 105.66 | wind | 7 | 43200 | < th | dose dependent | rect. | 24 | 18 |
| 985 | 105.71 | wind | 9 | 43200 | < th | dose dependent | rect. | 9 | 23 |
| 997 | 105.72 | wind | 1 | 43200 | > th | dose dependent | rect. | 20 | 23 |
| 999 | 105.73 | wind | 1 | 43200 | > th | dose dependent | no | NA | NA |