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Os02g0522700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.39 (0.0294) R2 : 0.458
β1 : -1.67 (0.111) R2dD : 0.305 R2D : 0.233
β2 : 0.804 (0.0742) R2dC : 0.152 R2C : 0.0724
β3 : -1.25 (0.146) R2dE : 0.114 R2E : -0.0187
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.158 (0.0661) R2dN8 : 0.0105 R2N8 : 0.0456
σ : 0.541
deviance : 135.06
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C
peak time of C : 2.37
E
wheather : temperature
threshold : 24
memory length : 61
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
125.39 0.526 9.37 -1.48 0.809 -1.39 1.84 -1.07 0.199 2.36 23.82 62 -- --
126.89 0.525 9.38 -1.56 0.782 -1.22 1.55 -- 0.174 2.5 24.1 68 -- --
135.16 0.541 9.38 -1.66 0.791 -1.33 -- 0.0451 0.183 2.38 23.41 60 -- --
135.06 0.541 9.39 -1.67 0.804 -1.25 -- -- 0.158 2.37 24 61 -- --
166.18 0.6 9.36 -1.59 -- -1.43 -- 0.466 0.293 -- 19.4 133 -- --
148.1 0.571 9.34 -1.34 0.612 -- 1.58 -- 0.369 2.71 -- -- -- --
156.8 0.586 9.34 -1.38 0.616 -- -- -- 0.359 2.7 -- -- -- --
166.16 0.6 9.36 -1.59 -- -1.61 -- -- 0.3 -- 19.36 133 -- --
201.1 0.664 9.33 -- 0.675 -0.66 -- -- 0.443 2.41 22.92 50 -- --
178.93 0.625 9.34 -1.35 -- -- -- -- 0.375 -- -- -- -- --
206.87 0.673 9.31 -- 0.589 -- -- -- 0.513 2.67 -- -- -- --
223.46 0.696 9.31 -- -- -1.35 -- -- 0.514 -- 15.03 77 -- --
227.15 0.703 9.31 -- -- -- -- -- 0.525 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 123.82 temperature 25 90 < th dose dependent rect. 16 19
2 123.84 temperature 25 10 < th dose dependent rect. 17 19
10 124.45 temperature 25 720 < th dose dependent rect. 16 7
16 124.62 temperature 25 10 < th dose dependent rect. 17 17
40 125.21 temperature 25 10 < th dose dependent rect. 17 15
68 125.68 temperature 25 90 < th dose dependent sin 11 NA
84 126.00 temperature 25 90 < th dose dependent rect. 19 16
111 126.30 temperature 25 10 < th dose dependent rect. 14 22
124 126.39 temperature 25 10 < th dose dependent rect. 5 23
129 126.44 temperature 25 90 < th dose dependent rect. 11 20
133 126.49 temperature 25 10 < th dose dependent rect. 9 23
135 126.51 temperature 25 10 < th dose dependent rect. 21 23
136 126.51 temperature 25 10 < th dose dependent rect. 23 23
137 126.53 temperature 25 10 < th dose dependent rect. 11 23
141 126.54 temperature 25 10 < th dose dependent rect. 3 23
146 126.58 temperature 25 10 < th dose dependent no NA NA
160 126.67 temperature 25 10 < th dose dependent rect. 19 23
177 126.74 temperature 25 10 < th dose dependent rect. 7 23
195 126.86 temperature 15 720 > th dose dependent rect. 17 7
204 126.91 temperature 25 30 < th dose dependent rect. 1 23
220 126.97 temperature 25 90 < th dose dependent rect. 19 14
319 127.59 radiation 1 1440 < th dose dependent rect. 6 11
387 127.94 temperature 25 90 < th dose dependent rect. 21 10
415 128.07 temperature 25 90 < th dose dependent rect. 21 12
563 128.74 temperature 10 90 > th dose dependent sin 10 NA
597 128.88 radiation 1 1440 > th dose independent rect. 6 10
600 128.91 radiation 1 1440 < th dose independent rect. 6 10
615 129.00 radiation 1 1440 < th dose independent rect. 6 8
622 129.06 radiation 1 1440 > th dose independent rect. 6 8
755 129.65 temperature 25 720 < th dose dependent sin 18 NA
759 129.66 temperature 25 720 < th dose independent rect. 14 10
944 130.31 temperature 20 30 < th dose independent rect. 17 20