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Os02g0521700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.43 (0.0189) R2 : 0.831
β1 : 2.06 (0.0692) R2dD : 0.341 R2D : 0.297
β2 : 1.7 (0.0465) R2dC : 0.496 R2C : 0.483
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.411 (0.0403) R2dN8 : 0.0515 R2N8 : -0.00908
σ : 0.355
deviance : 57.53
__
_____
C
peak time of C : 21.3
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
46.44 0.32 9.4 2.24 1.67 0.541 -1.12 -0.91 0.516 21.3 1.496 1450 -- --
47.27 0.32 9.4 2.17 1.68 0.663 -1.16 -- 0.517 21.4 0.82 1444 -- --
48.6 0.325 9.4 2.29 1.69 0.604 -- -1.98 0.507 20.7 1.75 1715 -- --
52.17 0.336 9.4 2.2 1.69 0.683 -- -- 0.523 21.3 0.8288 1442 -- --
116.51 0.505 9.37 2.07 -- 0.956 -- -1.12 0.445 -- 1.75 1715 -- --
52.15 0.339 9.43 2.02 1.69 -- -1.22 -- 0.409 21.4 -- -- -- --
57.53 0.355 9.43 2.06 1.7 -- -- -- 0.411 21.3 -- -- -- --
122.18 0.517 9.38 2.1 -- 0.959 -- -- 0.415 -- 0.8288 1442 -- --
151.91 0.574 9.46 -- 1.95 1.09 -- -- 0.282 21.2 9.81 3746 -- --
225.61 0.702 9.38 2.07 -- -- -- -- 0.404 -- -- -- -- --
169.47 0.609 9.48 -- 1.7 -- -- -- 0.181 21.4 -- -- -- --
238.39 0.721 9.43 -- -- 0.943 -- -- 0.182 -- 0.8288 1442 -- --
338.54 0.859 9.43 -- -- -- -- -- 0.175 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 44.66 humidity 60.0 10 > th dose dependent rect. 23 21
6 44.91 radiation 10.0 43200 < th dose dependent rect. 20 6
8 45.12 humidity 50.0 90 > th dose dependent rect. 23 12
10 45.19 temperature 15.0 720 > th dose dependent rect. 18 3
13 45.40 temperature 20.0 30 > th dose independent rect. 11 14
18 45.47 temperature 20.0 30 > th dose independent rect. 20 17
21 45.52 humidity 60.0 1440 > th dose dependent rect. 2 11
22 45.54 temperature 15.0 270 > th dose independent rect. 8 14
32 45.63 humidity 70.0 10 > th dose dependent rect. 23 19
50 45.74 radiation 20.0 270 < th dose independent rect. 22 10
53 45.76 temperature 25.0 720 > th dose independent rect. 18 3
55 45.76 temperature 15.0 270 > th dose dependent rect. 18 11
60 45.77 humidity 90.0 720 < th dose dependent rect. 24 12
61 45.78 temperature 20.0 10 > th dose dependent rect. 20 10
78 45.84 humidity 90.0 720 < th dose dependent rect. 22 14
83 45.87 radiation 40.0 10 < th dose dependent rect. 23 21
85 45.89 temperature 25.0 720 < th dose independent rect. 13 11
86 45.89 humidity 80.0 270 > th dose independent rect. 22 17
97 45.91 humidity 50.0 1440 > th dose dependent sin 5 NA
98 45.91 radiation 1.0 43200 < th dose dependent rect. 21 3
103 45.95 radiation 30.0 10 < th dose independent rect. 23 12
141 46.04 radiation 1.0 270 < th dose independent rect. 21 21
144 46.05 humidity 70.0 270 > th dose independent rect. 22 10
159 46.09 temperature 20.0 10 > th dose dependent rect. 20 5
162 46.09 temperature 25.0 10 < th dose dependent rect. 14 17
164 46.10 radiation 30.0 270 < th dose dependent rect. 22 10
170 46.11 precipitation 0.1 720 < th dose independent rect. 24 23
177 46.11 precipitation 0.1 720 < th dose dependent rect. 24 23
188 46.14 temperature 25.0 10 < th dose dependent rect. 12 19
203 46.16 temperature 30.0 270 < th dose dependent rect. 13 16
247 46.23 humidity 90.0 270 < th dose independent rect. 3 9
254 46.24 humidity 80.0 720 < th dose independent rect. 11 1
291 46.29 humidity 90.0 270 < th dose independent rect. 3 19
295 46.29 radiation 40.0 10 < th dose dependent rect. 23 12
340 46.36 humidity 90.0 270 < th dose independent rect. 5 17
348 46.37 wind 1.0 90 > th dose independent rect. 1 18
363 46.38 humidity 60.0 10 > th dose dependent sin 4 NA
397 46.42 humidity 90.0 1440 < th dose dependent sin 5 NA
410 46.44 humidity 90.0 270 < th dose independent rect. 7 15
491 46.52 humidity 70.0 270 > th dose dependent sin 6 NA
501 46.53 radiation 40.0 10 < th dose dependent sin 6 NA
561 46.58 temperature 25.0 270 < th dose independent rect. 12 16
563 46.58 humidity 90.0 720 < th dose dependent rect. 11 1
606 46.63 humidity 80.0 1440 > th dose independent rect. 2 11
610 46.63 humidity 70.0 10 > th dose independent rect. 23 21
631 46.64 humidity 70.0 10 > th dose dependent rect. 23 15
635 46.64 radiation 1.0 270 < th dose dependent rect. 21 21
650 46.66 wind 1.0 270 > th dose independent rect. 4 13
651 46.66 humidity 80.0 1440 > th dose independent rect. 24 13
654 46.66 radiation 1.0 1440 > th dose independent rect. 18 23
666 46.67 radiation 1.0 1440 < th dose independent rect. 18 23
680 46.68 humidity 80.0 270 > th dose independent sin 6 NA
683 46.68 wind 1.0 90 > th dose independent rect. 23 21
712 46.70 radiation 1.0 1440 < th dose independent rect. 13 18
713 46.70 radiation 1.0 1440 < th dose independent rect. 10 21
735 46.72 atmosphere 1015.0 270 < th dose independent rect. 8 14
738 46.72 radiation 1.0 1440 > th dose independent rect. 10 21
757 46.73 humidity 80.0 1440 < th dose independent rect. 23 14
794 46.75 radiation 1.0 1440 > th dose independent rect. 13 18
796 46.75 radiation 40.0 10 < th dose independent rect. 23 21
848 46.78 humidity 80.0 1440 > th dose independent sin 5 NA
866 46.79 precipitation 0.1 720 < th dose independent rect. 24 15
884 46.79 precipitation 0.1 720 < th dose dependent rect. 24 15
893 46.80 radiation 1.0 1440 < th dose independent rect. 15 15
896 46.80 radiation 1.0 1440 < th dose independent rect. 15 23
908 46.81 radiation 1.0 1440 < th dose independent rect. 2 17
934 46.82 humidity 80.0 1440 < th dose independent rect. 5 8
937 46.82 temperature 15.0 270 > th dose independent rect. 1 11
940 46.82 radiation 1.0 1440 < th dose independent rect. 4 15
954 46.82 radiation 1.0 1440 < th dose independent rect. 13 23
965 46.83 radiation 1.0 1440 < th dose independent sin 13 NA
966 46.83 radiation 1.0 1440 < th dose independent no NA NA
969 46.83 radiation 1.0 1440 > th dose independent rect. 15 15
982 46.83 radiation 1.0 1440 > th dose independent rect. 15 23
996 46.84 humidity 80.0 1440 < th dose independent sin 5 NA