Os02g0521300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : C2 domain containing protein.
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Os02g0521300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : C2 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.13 | 0.274 | 11.6 | -0.325 | 0.623 | -0.443 | 0.127 | 0.453 | 0.166 | 3.35 | 10.75 | 1309 | -- | -- |
| 34.24 | 0.273 | 11.6 | -0.341 | 0.615 | -0.483 | 0.239 | -- | 0.146 | 2.87 | 10.75 | 1203 | -- | -- |
| 33.93 | 0.271 | 11.6 | -0.337 | 0.61 | -0.462 | -- | 0.514 | 0.166 | 2.98 | 11.67 | 1225 | -- | -- |
| 33.83 | 0.271 | 11.6 | -0.402 | 0.57 | -0.555 | -- | -- | 0.123 | 2.03 | 10.75 | 1058 | -- | -- |
| 45.06 | 0.313 | 11.6 | -0.376 | -- | -0.749 | -- | 0.416 | 0.155 | -- | 35.31 | 455 | -- | -- |
| 39.48 | 0.295 | 11.7 | -0.513 | 0.585 | -- | 0.102 | -- | 0.0209 | 3.92 | -- | -- | -- | -- |
| 39.51 | 0.294 | 11.7 | -0.514 | 0.585 | -- | -- | -- | 0.0203 | 3.92 | -- | -- | -- | -- |
| 37.21 | 0.284 | 11.7 | -0.51 | -- | -0.598 | -- | -- | 0.0522 | -- | 3.68 | 490 | -- | -- |
| 37.81 | 0.286 | 11.6 | -- | 0.517 | -0.595 | -- | -- | 0.141 | 1.66 | 10.47 | 1037 | -- | -- |
| 58.28 | 0.357 | 11.7 | -0.49 | -- | -- | -- | -- | 0.0359 | -- | -- | -- | -- | -- |
| 46.48 | 0.319 | 11.6 | -- | 0.575 | -- | -- | -- | 0.0776 | 3.93 | -- | -- | -- | -- |
| 43.3 | 0.306 | 11.6 | -- | -- | -0.598 | -- | -- | 0.129 | -- | 10.31 | 408 | -- | -- |
| 64.62 | 0.375 | 11.7 | -- | -- | -- | -- | -- | 0.0903 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.61 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 24 | 5 |
| 7 | 32.68 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 9 |
| 9 | 32.75 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 19 | 10 |
| 10 | 32.78 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 11 | 32.79 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 13 | 32.83 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 7 | 22 |
| 32 | 33.12 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 8 | 5 |
| 34 | 33.12 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 5 |
| 35 | 33.13 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 37 | 33.13 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 61 | 33.22 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 24 | 5 |
| 70 | 33.26 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 71 | 33.26 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 118 | 33.53 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 147 | 33.69 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 14 |
| 161 | 33.72 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 195 | 33.82 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 5 | 18 |
| 198 | 33.83 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 210 | 33.88 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 212 | 33.88 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 23 |
| 222 | 33.93 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 247 | 33.99 | radiation | 10.0 | 1440 | < th | dose dependent | sin | 20 | NA |
| 280 | 34.04 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 20 | 7 |
| 296 | 34.08 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 320 | 34.13 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 1 | 4 |
| 345 | 34.16 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 401 | 34.20 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 22 |
| 439 | 34.26 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 5 | 18 |
| 443 | 34.27 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 7 |
| 474 | 34.30 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 515 | 34.34 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 531 | 34.36 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 14 | 14 |
| 536 | 34.37 | wind | 7.0 | 4320 | > th | dose independent | rect. | 15 | 4 |
| 543 | 34.37 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 11 | 22 |
| 550 | 34.38 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 553 | 34.38 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 15 | 12 |
| 562 | 34.38 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 565 | 34.39 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 19 | 10 |
| 584 | 34.41 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 601 | 34.43 | humidity | 70.0 | 43200 | > th | dose dependent | sin | 15 | NA |
| 608 | 34.44 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 7 |
| 615 | 34.45 | radiation | 10.0 | 1440 | > th | dose independent | sin | 0 | NA |
| 646 | 34.45 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 718 | 34.50 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 13 | 23 |
| 726 | 34.51 | temperature | 25.0 | 270 | < th | dose independent | rect. | 3 | 18 |
| 764 | 34.53 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 816 | 34.57 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 817 | 34.58 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 835 | 34.59 | temperature | 25.0 | 90 | < th | dose independent | rect. | 5 | 18 |
| 836 | 34.59 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 23 |
| 856 | 34.59 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 23 |
| 862 | 34.60 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 11 |
| 903 | 34.63 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 928 | 34.65 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 930 | 34.65 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 13 |
| 983 | 34.68 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 12 |
| 989 | 34.68 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 13 |