Os02g0518100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF803 family protein.
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Os02g0518100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF803 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.71 | 0.314 | 10.8 | -0.283 | 2.12 | -1.24 | 0.789 | 0.162 | -0.0377 | 5.37 | 18 | 272 | -- | -- |
| 44.73 | 0.311 | 10.8 | -0.308 | 2.12 | -1.23 | 0.761 | -- | -0.044 | 5.36 | 18 | 273 | -- | -- |
| 45.73 | 0.315 | 10.8 | -0.361 | 2.12 | -1.24 | -- | -0.363 | -0.0474 | 5.23 | 17.98 | 326 | -- | -- |
| 45.96 | 0.316 | 10.8 | -0.319 | 2.12 | -1.22 | -- | -- | -0.0424 | 5.24 | 18.57 | 326 | -- | -- |
| 181.84 | 0.628 | 10.7 | -0.0476 | -- | -2.92 | -- | 0.693 | 0.0894 | -- | 24.2 | 274 | -- | -- |
| 66.96 | 0.384 | 10.8 | -0.608 | 2.55 | -- | 1.02 | -- | -0.251 | 5.26 | -- | -- | -- | -- |
| 69.56 | 0.391 | 10.8 | -0.607 | 2.55 | -- | -- | -- | -0.256 | 5.23 | -- | -- | -- | -- |
| 182.56 | 0.629 | 10.8 | -0.0584 | -- | -2.81 | -- | -- | 0.078 | -- | 24.3 | 294 | -- | -- |
| 48.16 | 0.323 | 10.8 | -- | 2.08 | -1.41 | -- | -- | 0.00163 | 5.23 | 17.32 | 338 | -- | -- |
| 410.28 | 0.946 | 10.8 | -0.518 | -- | -- | -- | -- | -0.192 | -- | -- | -- | -- | -- |
| 79.27 | 0.416 | 10.8 | -- | 2.54 | -- | -- | -- | -0.189 | 5.24 | -- | -- | -- | -- |
| 182.65 | 0.629 | 10.8 | -- | -- | -2.82 | -- | -- | 0.0857 | -- | 24.29 | 294 | -- | -- |
| 417.36 | 0.954 | 10.8 | -- | -- | -- | -- | -- | -0.135 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 39.22 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 12 |
| 4 | 39.74 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 13 |
| 10 | 40.80 | temperature | 10 | 720 | > th | dose dependent | rect. | 5 | 5 |
| 11 | 40.80 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 12 |
| 20 | 40.96 | temperature | 15 | 270 | > th | dose dependent | rect. | 22 | 21 |
| 29 | 41.18 | temperature | 20 | 90 | > th | dose dependent | rect. | 1 | 19 |
| 51 | 41.52 | temperature | 30 | 720 | < th | dose dependent | sin | 5 | NA |
| 78 | 41.94 | temperature | 10 | 720 | > th | dose dependent | sin | 6 | NA |
| 117 | 42.37 | temperature | 10 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 283 | 43.65 | temperature | 10 | 270 | > th | dose dependent | sin | 0 | NA |
| 445 | 44.44 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 14 |
| 469 | 44.56 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 565 | 45.03 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 571 | 45.06 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 643 | 45.35 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 22 |
| 728 | 45.65 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 20 |
| 852 | 46.10 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 983 | 46.48 | temperature | 25 | 270 | > th | dose independent | rect. | 1 | 17 |
| 989 | 46.50 | temperature | 25 | 270 | > th | dose independent | rect. | 6 | 12 |
| 998 | 46.51 | temperature | 25 | 720 | < th | dose independent | rect. | 3 | 10 |