BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0518100 Os02g0518100|AK103390
(416 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G26670.1 | chr3:9798236-9800562 REVERSE LENGTH=442 548 e-156
AT1G34470.1 | chr1:12604574-12606758 FORWARD LENGTH=369 67 2e-11
AT3G23870.1 | chr3:8620253-8621755 FORWARD LENGTH=336 66 4e-11
AT4G13800.1 | chr4:8002129-8003858 REVERSE LENGTH=337 61 1e-09
AT4G09640.1 | chr4:6088433-6090604 REVERSE LENGTH=387 60 2e-09
AT2G21120.1 | chr2:9052103-9054266 REVERSE LENGTH=329 57 1e-08
AT1G71900.1 | chr1:27061754-27064053 FORWARD LENGTH=344 57 2e-08
AT4G38730.1 | chr4:18080484-18082305 REVERSE LENGTH=327 55 7e-08
>AT3G26670.1 | chr3:9798236-9800562 REVERSE LENGTH=442
Length = 441
Score = 548 bits (1411), Expect = e-156, Method: Compositional matrix adjust.
Identities = 267/426 (62%), Positives = 326/426 (76%), Gaps = 13/426 (3%)
Query: 1 MGDWVIGALINIVGSVAINFGTNLLKLGHDQREKLSTTNNNQGNDKFVPKSVMHFQTWRI 60
MG+WVIGA INI GSVAINFGTNLLKLGH++RE+L+ + G K K ++H QTWR+
Sbjct: 1 MGEWVIGAFINIFGSVAINFGTNLLKLGHNERERLALQD---GGGKMPLKPIIHNQTWRV 57
Query: 61 GILFFAAGNCLNFMSFAYAAQSLLAALGSIQFVSNIAFAYFVLNKTISVKVMVATTFIVF 120
GIL F GNCLNF+SF YAAQSLLAALGSIQFVSNIAFAY VLNK ++VKV+VAT FIV
Sbjct: 58 GILVFLLGNCLNFISFGYAAQSLLAALGSIQFVSNIAFAYVVLNKMVTVKVLVATAFIVL 117
Query: 121 GNIFLVSFGNHQSPVYTPEQLVAKYSNLVFVLYCMSLVFVVAFNQYLYRSGETIISDSAK 180
GN+FLV+FGNHQSPV+TPEQL KYSN+ F++YC L+ +VA + +LYR GE +IS +
Sbjct: 118 GNVFLVAFGNHQSPVFTPEQLAEKYSNVTFLVYCGILILIVAVHHFLYRKGEVLISTPGQ 177
Query: 181 HTGSHWRTLLPFSYAIVSGAIGSCSVLFAKSLSNMLRLTMSSRYQFHSWFTYSMLLLFLF 240
S+W+ LLPFSYA+VSGAIGSCSVLFAKSLSN+LRL MSS YQ HSWFTYSMLLLFL
Sbjct: 178 EISSYWKMLLPFSYAVVSGAIGSCSVLFAKSLSNLLRLAMSSSYQLHSWFTYSMLLLFLS 237
Query: 241 TAGFWMARLNEGLSLFDAILIVPMFQIAWTFFSICTGFVYFQEYQVFDTLRIVMFVLGMT 300
TAGFWM RLNEGLSL+DAILIVPMFQIAWTFFSICTG +YFQE+QVFD LR MF+LGM
Sbjct: 238 TAGFWMTRLNEGLSLYDAILIVPMFQIAWTFFSICTGCIYFQEFQVFDALRTTMFILGMM 297
Query: 301 SVFIGISLLAPDDSKDGSSATQEPAIDANRPGKMQTEETEV------DG----TNSFTSS 350
VFIGISLLAPDD++ + ++D+ + TEE + DG T
Sbjct: 298 CVFIGISLLAPDDTRGNETKDNSSSLDSIVSSSVPTEEDRLIPQSSEDGHSKDTRVVVQG 357
Query: 351 VKVKAKRILSKAKSACSMSLGLGEETISASSVLAMPMVSSRTTGFRGIATDRSKYIPLRS 410
+ +KA +++K K+AC +LG GE++I+AS++L MPMVSS+ TGFRG +R+K + +R
Sbjct: 358 MYMKAADLIAKTKTACLAALGFGEDSINASAILVMPMVSSKITGFRGNGLERAKILSMRG 417
Query: 411 TDWDNL 416
+ W L
Sbjct: 418 SGWSKL 423
>AT1G34470.1 | chr1:12604574-12606758 FORWARD LENGTH=369
Length = 368
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 119/266 (44%), Gaps = 19/266 (7%)
Query: 58 WRIGILFFAAGNCLNFMSFAYAAQSLLAALGSIQFVSNIAFAYFVLNKTISVKVMVATTF 117
W +G++ G NF ++A+A L+ LG++ + + A A+ +L++ + ++
Sbjct: 67 WWVGMITMIVGEIANFAAYAFAPAILVTPLGALSIIISAALAHVILHEKLHTFGLLGCVL 126
Query: 118 IVFGNIFLVSFGNHQSPVYTPEQLVAKYSNLVFVLYCMSLVFVVA--FNQYLYRSGETII 175
V G+I +V + + + Q+ + F+LY ++V Q++ + G++ +
Sbjct: 127 CVVGSITIVLHAPQEQEIDSVLQVWNLATEPAFLLYAAAVVGAAIILIVQFVPQYGQSHV 186
Query: 176 SDSAKHTGSHWRTLLPFSYAIVSGAIGSCSVLFAKSLSNMLRLTMSSRYQFHSWFTYSML 235
Y V +GS SV+ K+L L+LT S Q T+
Sbjct: 187 ----------------MVYIGVCSLVGSLSVMSVKALGIALKLTFSGMNQLIYPQTWVFT 230
Query: 236 LLFLFTAGFWMARLNEGLSLFDAILIVPMFQIAWTFFSICTGFVYFQEYQVFDTLRIVMF 295
L+ L M LN+ L F+ ++ P++ + +T +I + F+++ D +IV
Sbjct: 231 LIVLTCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQDGTQIVTE 290
Query: 296 VLGMTSVFIGISLL-APDDSKDGSSA 320
+ G ++ G LL D DGSS+
Sbjct: 291 LCGFVTILSGTFLLHKTKDMVDGSSS 316
>AT3G23870.1 | chr3:8620253-8621755 FORWARD LENGTH=336
Length = 335
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 131/287 (45%), Gaps = 27/287 (9%)
Query: 58 WRIGILFFAAGNCLNFMSFAYAAQSLLAALGSIQFVSNIAFAYFVLNKTISVKVMVATTF 117
W G++ G NF ++A+A L+ LG++ + + A+F+L + + + ++
Sbjct: 56 WWAGMITMIVGEVANFAAYAFAPAILVTPLGALSIIFSAVLAHFILKEKLHMFGILGCIL 115
Query: 118 IVFGNIFLVSFGNHQSPVYTPEQLVAKYSNLVFVLYCMSLVFVVAFNQYLY--RSGETII 175
V G+ +V H+ + + +Q+ F++Y +V VVA + Y R G+T +
Sbjct: 116 CVVGSTTIVLHAPHEQKIESVKQIWQLAIEPGFLVYSAVIVIVVAILIFYYEPRYGKTHM 175
Query: 176 SDSAKHTGSHWRTLLPFSYAIVSGAIGSCSVLFAKSLSNMLRLTMSSRYQFHSWFTYSML 235
Y + +GS +V+ K+++ ++LT S QF + T+ +
Sbjct: 176 ----------------IVYVGICSLMGSLTVMSVKAVAIAIKLTFSGTNQFKYFNTWIFI 219
Query: 236 LLFLFTAGFWMARLNEGLSLFDAILIVPMFQIAWTFFSICTGFVYFQEYQVFDTLRIVMF 295
L+ + LN+ L F+ +I P++ + +T F+I + F+++ L+I
Sbjct: 220 LVVATCCILQINYLNKALDTFNTAVISPVYYVMFTTFTIIASMIMFKDWASQSGLKIATE 279
Query: 296 VLGMTSVFIGISLLAPDDSKD-GSSATQEPAIDANRPGKMQTEETEV 341
+ G ++ G LL +KD G+SA+ +I M T +T V
Sbjct: 280 LCGFVTILSGTFLL--HKTKDMGNSASGRGSIS------MPTRDTPV 318
>AT4G13800.1 | chr4:8002129-8003858 REVERSE LENGTH=337
Length = 336
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 123/276 (44%), Gaps = 20/276 (7%)
Query: 58 WRIGILFFAAGNCLNFMSFAYAAQSLLAALGSIQFVSNIAFAYFVLNKTISVKVMVATTF 117
W G++ G NF ++A+A L+ LG++ + + A+F+L + + + ++
Sbjct: 56 WWAGMITMIVGEIANFAAYAFAPAILVTPLGALSIIFSAVLAHFILEEKLHMFGILGCVL 115
Query: 118 IVFGNIFLVSFGNHQSPVYTPEQLVAKYSNLVFVLYCMSLVFVVAFNQYLY--RSGETII 175
V G+ +V H+ + + +Q+ + F+ Y ++ VV + Y R G+T +
Sbjct: 116 CVVGSTTIVLHAPHEQGIESVKQVWHLATEPGFLAYSAVVLVVVLALIFYYEPRYGKTHM 175
Query: 176 SDSAKHTGSHWRTLLPFSYAIVSGAIGSCSVLFAKSLSNMLRLTMSSRYQFHSWFTYSML 235
Y + +GS +V+ K+++ ++LT S QF + + +
Sbjct: 176 ----------------IVYVGICSLMGSLTVMSVKAVAIAIKLTFSGMNQFKYFHAWIFI 219
Query: 236 LLFLFTAGFWMARLNEGLSLFDAILIVPMFQIAWTFFSICTGFVYFQEYQVFDTLRIVMF 295
++ + LN+ L F+ +I P++ + +T F+I + F+++ L+I
Sbjct: 220 IVVTICCILQINYLNKALDNFNTAVISPVYYVMFTTFTILASMIMFKDWASQSGLQIATE 279
Query: 296 VLGMTSVFIGISLLAPDDSKDGSSATQEPAIDANRP 331
+ G ++ G LL +KD ++T ++ P
Sbjct: 280 LCGFVTILSGTFLL--HKTKDMGNSTSLRGSTSHSP 313
>AT4G09640.1 | chr4:6088433-6090604 REVERSE LENGTH=387
Length = 386
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 119/285 (41%), Gaps = 32/285 (11%)
Query: 58 WRIGILFFAAGNCLNFMSFAYAAQSLLAALGSIQFVSNIAFAYFVLNKTISVKVMVATTF 117
W IG++ G NF ++A+A L+ LG++ + + + A+ +L + + ++
Sbjct: 67 WWIGMITMIVGEIANFAAYAFAPAILVTPLGALSIIISASLAHIILQEKLHTFGILGCAL 126
Query: 118 IVFGNIFLVSFGNHQSPVYTPEQLVAKYSNLVFVLYCMSLVFVVAFNQYLYRSGET---- 173
+ G++ +V ++ P++ ++V VL +L AF Y
Sbjct: 127 CIVGSVTIV--------LHAPQE-----QDIVSVLEVWNLATEPAFLFYAAAVVGAAIVL 173
Query: 174 IISDSAKHTGSHWRTLLPFSYAIVSGAIGSCSVLFAKSLSNMLRLTMSSRYQFHSWFTYS 233
I+ + SH Y V IGS SV+ K+L L+LT S Q T+
Sbjct: 174 IVQFIPLYGQSHVMV-----YIGVCSLIGSLSVMSVKALGIALKLTFSGTNQLGYPQTWV 228
Query: 234 MLLLFLFTAGFWMARLNEGLSLFDAILIVPMFQIAWTFFSICTGFVYFQEYQVFDTLRIV 293
++ LF M LN+ L F+ ++ P++ + +T +I + F+++ +I+
Sbjct: 229 FTVIVLFCVITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQSGTQIM 288
Query: 294 MFVLGMTSVFIGISLLAPDDSKDGSSATQEPAIDANRPGKMQTEE 338
+ G ++ G LL T +D G + +EE
Sbjct: 289 TELCGFVTILSGTFLL----------HTTTDMVDGESKGNLSSEE 323
>AT2G21120.1 | chr2:9052103-9054266 REVERSE LENGTH=329
Length = 328
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 118/269 (43%), Gaps = 20/269 (7%)
Query: 58 WRIGILFFAAGNCLNFMSFAYAAQSLLAALGSIQFVSNIAFAYFVLNKTIS-VKVMVATT 116
W G++ G NF+++ YA L+ LG++ + + A+F+L + + + V+ +
Sbjct: 53 WWAGMVTMIVGEAANFVAYIYAPAVLVTPLGALSIIISAVLAHFLLKEKLKKMGVLGCVS 112
Query: 117 FIVFGNIFLVSFGNHQSPVYTPE--QLVAKYSNLVFVLYCMSLVFVVAFNQYLYRSGETI 174
IV + ++ Q+P E L + + L++V MS+V + + + G+T
Sbjct: 113 CIVGSVVIVIHAPKEQTPNSVEEIWNLATQPAFLIYVAITMSIVLALILH-FEPLCGQTN 171
Query: 175 ISDSAKHTGSHWRTLLPFSYAIVSGAIGSCSVLFAKSLSNMLRLTMSSRYQFHSWFTYSM 234
I Y + +G+ +V+ K++ ++LTM Q T+
Sbjct: 172 I----------------LVYIGICSLMGALTVMSIKAIGIAIKLTMEGVSQIGYPQTWLF 215
Query: 235 LLLFLFTAGFWMARLNEGLSLFDAILIVPMFQIAWTFFSICTGFVYFQEYQVFDTLRIVM 294
+++ + + LN+ L F+A ++ P++ + +T +I + F+++ D +
Sbjct: 216 VMVAVTCVVTQLIYLNKALDTFNAAIVSPVYYVMFTTLTIVASAIMFKDWSGQDAASVAS 275
Query: 295 FVLGMTSVFIGISLLAPDDSKDGSSATQE 323
+ G +V G +L ++ A+ E
Sbjct: 276 ELCGFITVLTGTMILHGTREEEQQQASSE 304
>AT1G71900.1 | chr1:27061754-27064053 FORWARD LENGTH=344
Length = 343
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 124/290 (42%), Gaps = 22/290 (7%)
Query: 33 EKLSTTNNNQGNDKFVPKSVMHFQTWRIGILFFAAGNCLNFMSFAYAAQSLLAALGSIQF 92
+K ++T G + S ++ W IG+ G NF ++A+A L+ LG++
Sbjct: 45 KKAASTGTRAGVGGY---SYLYEPLWWIGMTTMLLGEIANFAAYAFAPAILVTPLGAVSI 101
Query: 93 VSNIAFAYFVLNKTISVKVMVATTFIVFGNIFLVSFGNHQSPVYTPEQLVAKYSNLVFVL 152
+ + A+ +L + + + ++ V G+ +V + + + ++ + F+
Sbjct: 102 IISAVLAHIILREKLHIFGILGCALCVVGSTTIVLHAPQEREIDSVIEVWNLATEPAFMF 161
Query: 153 YCMSLVFVVAF--NQYLYRSGETIISDSAKHTGSHWRTLLPFSYAIVSGAIGSCSVLFAK 210
Y ++ F +++ + G+T + Y + +GS SV+ K
Sbjct: 162 YASLVIGAAVFLIIRFVPQYGQTNV----------------MVYIGICSLVGSLSVMSVK 205
Query: 211 SLSNMLRLTMSSRYQFHSWFTYSMLLLFLFTAGFWMARLNEGLSLFDAILIVPMFQIAWT 270
+L L+LT S Q T+ L+ L + LN+ L F+ ++ P++ + +T
Sbjct: 206 ALGIALKLTFSGTNQLFYPQTWIFTLVVLTCVVTQLNYLNKALDTFNTAIVSPIYYVMFT 265
Query: 271 FFSICTGFVYFQEYQVFDTLRIVMFVLGMTSVFIGISLL-APDDSKDGSS 319
+I + F+++ + +IV + G ++ G LL D +GSS
Sbjct: 266 SLTILASVIMFKDWDRQNGTQIVTEICGFVTILSGTFLLHRTKDMVEGSS 315
>AT4G38730.1 | chr4:18080484-18082305 REVERSE LENGTH=327
Length = 326
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 125/280 (44%), Gaps = 28/280 (10%)
Query: 58 WRIGILFFAAGNCLNFMSFAYAAQSLLAALGSIQFVSNIAFAYFVLNKTISVKVMVATTF 117
W +G++ G NF+++ YA L+ LG++ + + A+F+L++ + +
Sbjct: 53 WWVGLVTMTFGEIANFVAYVYAPAVLVTPLGALSIIISAVLAHFLLDEKLRKMGVWGCVC 112
Query: 118 IVFGNIFLVSFG-NHQSPVYTPE--QLVAKYSNLVFVLYCMSLVF-VVAFNQYLYRSGET 173
+ G++ +V Q+P E +L + + L++V MS+V ++ + + L G+T
Sbjct: 113 CIVGSVMIVIHAPQEQTPNSVEEIWKLAMQPAFLIYVAISMSIVLALILYCEPL--CGQT 170
Query: 174 IISDSAKHTGSHWRTLLPFSYAIVSGAIGSCSVLFAKSLSNMLRLTMSSRYQF---HSWF 230
I Y + +GS +V+ K++ ++LT Q +WF
Sbjct: 171 NI----------------LVYIGICSLMGSLTVMSIKAVGIAIKLTFEGINQIWYPETWF 214
Query: 231 TYSMLLLFLFTAGFWMARLNEGLSLFDAILIVPMFQIAWTFFSICTGFVYFQEYQVFDTL 290
++M+ M LN+ L F+A ++ P++ + +T +I + F+++ +T
Sbjct: 215 -FAMVAAICVVMQ--MIYLNKALDTFNAAIVSPIYYVMFTTLTIVASAIMFKDWNGQNTD 271
Query: 291 RIVMFVLGMTSVFIGISLLAPDDSKDGSSATQEPAIDANR 330
I + G +V G +L ++ +S + D+ +
Sbjct: 272 SIASEICGFITVLTGTVILHSTREEEQASPRRMRWQDSGK 311
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.325 0.135 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,198,374
Number of extensions: 314990
Number of successful extensions: 1044
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 1033
Number of HSP's successfully gapped: 8
Length of query: 416
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 315
Effective length of database: 8,337,553
Effective search space: 2626329195
Effective search space used: 2626329195
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 113 (48.1 bits)