Os02g0516400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : WW/Rsp5/WWP domain containing protein.
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Os02g0516400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : WW/Rsp5/WWP domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 87.89 | 0.44 | 5.98 | 0.86 | 0.16 | -2.2 | -0.311 | 0.63 | -0.166 | 20.1 | 15.05 | 682 | -- | -- |
| 88 | 0.437 | 5.99 | 0.749 | 0.181 | -2.23 | -0.186 | -- | -0.191 | 19.3 | 14.8 | 647 | -- | -- |
| 87.98 | 0.437 | 5.98 | 0.848 | 0.186 | -2.17 | -- | 0.516 | -0.168 | 19.4 | 15.61 | 648 | -- | -- |
| 88.09 | 0.437 | 5.99 | 0.754 | 0.183 | -2.24 | -- | -- | -0.194 | 19.4 | 14.82 | 647 | -- | -- |
| 89.31 | 0.44 | 5.98 | 0.841 | -- | -2.09 | -- | 0.508 | -0.193 | -- | 14.9 | 682 | -- | -- |
| 149.43 | 0.573 | 6.05 | 0.189 | 0.383 | -- | 0.481 | -- | -0.538 | 7.99 | -- | -- | -- | -- |
| 150.11 | 0.574 | 6.05 | 0.203 | 0.381 | -- | -- | -- | -0.538 | 8.12 | -- | -- | -- | -- |
| 89.38 | 0.44 | 5.99 | 0.725 | -- | -2.08 | -- | -- | -0.216 | -- | 14.8 | 690 | -- | -- |
| 101.01 | 0.468 | 6.03 | -- | 0.151 | -1.79 | -- | -- | -0.328 | 18.5 | 16.41 | 596 | -- | -- |
| 158.1 | 0.588 | 6.06 | 0.206 | -- | -- | -- | -- | -0.533 | -- | -- | -- | -- | -- |
| 151.19 | 0.575 | 6.06 | -- | 0.383 | -- | -- | -- | -0.561 | 8.08 | -- | -- | -- | -- |
| 101.57 | 0.469 | 6.01 | -- | -- | -1.67 | -- | -- | -0.327 | -- | 16.79 | 648 | -- | -- |
| 159.22 | 0.589 | 6.07 | -- | -- | -- | -- | -- | -0.556 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 81.76 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 4 | 84.16 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 7 | 85.02 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 10 | 85.29 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 11 | 85.50 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 14 | 85.57 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 21 | 85.90 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 9 |
| 25 | 86.06 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 36 | 86.29 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 16 |
| 56 | 86.57 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 59 | 86.60 | temperature | 20 | 1440 | > th | dose dependent | sin | 13 | NA |
| 61 | 86.63 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 68 | 86.73 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 3 |
| 69 | 86.73 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 5 |
| 71 | 86.75 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 86 | 86.89 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 22 |
| 92 | 86.95 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 98 | 87.02 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 101 | 87.04 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 111 | 87.12 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 113 | 87.15 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 4 |
| 134 | 87.29 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 157 | 87.50 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 170 | 87.57 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 17 |
| 218 | 87.78 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 20 |
| 271 | 87.99 | radiation | 1 | 43200 | < th | dose dependent | rect. | 20 | 4 |
| 276 | 88.01 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 302 | 88.07 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 349 | 88.20 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |
| 408 | 88.36 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 429 | 88.42 | temperature | 30 | 1440 | < th | dose dependent | sin | 13 | NA |
| 458 | 88.51 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 464 | 88.52 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 542 | 88.74 | temperature | 15 | 720 | > th | dose dependent | rect. | 4 | 23 |
| 547 | 88.75 | temperature | 20 | 1440 | > th | dose dependent | rect. | 8 | 23 |
| 579 | 88.81 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 23 |
| 735 | 89.10 | radiation | 1 | 43200 | < th | dose dependent | rect. | 20 | 8 |