Os02g0515000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0515000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53.46 | 0.344 | 9.8 | -2.82 | 0.448 | 1.11 | 0.323 | -1.67 | -0.999 | 8.87 | 20.3 | 1461 | -- | -- |
| 56.36 | 0.352 | 9.74 | -2.26 | 0.705 | 1.57 | 0.201 | -- | -0.873 | 4.94 | 18.08 | 5436 | -- | -- |
| 53.78 | 0.342 | 9.8 | -2.83 | 0.451 | 1.11 | -- | -1.74 | -1 | 8.68 | 20.6 | 1485 | -- | -- |
| 56.47 | 0.352 | 9.74 | -2.26 | 0.705 | 1.56 | -- | -- | -0.873 | 4.92 | 18.08 | 5436 | -- | -- |
| 65.21 | 0.376 | 9.81 | -2.81 | -- | 1.1 | -- | -1.67 | -0.993 | -- | 20.36 | 1460 | -- | -- |
| 89.09 | 0.442 | 9.68 | -1.93 | 0.443 | -- | 0.303 | -- | -0.615 | 8.37 | -- | -- | -- | -- |
| 89.37 | 0.443 | 9.68 | -1.92 | 0.444 | -- | -- | -- | -0.615 | 8.25 | -- | -- | -- | -- |
| 68.22 | 0.385 | 9.75 | -2.52 | -- | 1.26 | -- | -- | -0.87 | -- | 16 | 4448 | -- | -- |
| 179.89 | 0.628 | 9.66 | -- | 0.48 | 0.688 | -- | -- | -0.498 | 6.63 | 18.08 | 5436 | -- | -- |
| 100.28 | 0.468 | 9.69 | -1.92 | -- | -- | -- | -- | -0.61 | -- | -- | -- | -- | -- |
| 186.84 | 0.639 | 9.63 | -- | 0.436 | -- | -- | -- | -0.401 | 8.57 | -- | -- | -- | -- |
| 161.25 | 0.591 | 9.58 | -- | -- | -0.94 | -- | -- | -0.0992 | -- | 15 | 47520 | -- | -- |
| 197.51 | 0.656 | 9.65 | -- | -- | -- | -- | -- | -0.397 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 52.20 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 2 | 52.21 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 3 | 52.21 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 2 |
| 4 | 52.56 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 5 | 53.05 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 11 | 18 |
| 19 | 53.14 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 13 | 13 |
| 29 | 53.17 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 36 | 53.20 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 17 | NA |
| 44 | 53.23 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 48 | 53.26 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 92 | 53.49 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 93 | 53.49 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 95 | 53.49 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 104 | 53.51 | temperature | 20.0 | 1440 | > th | dose dependent | no | NA | NA |
| 110 | 53.52 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 134 | 53.57 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 136 | 53.57 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 173 | 53.64 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 201 | 53.73 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 232 | 53.82 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 17 | 13 |
| 263 | 53.95 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 314 | 54.23 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 349 | 54.39 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 359 | 54.46 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 385 | 54.56 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 462 | 54.80 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 469 | 54.82 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 6 |
| 571 | 54.92 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 18 | 20 |
| 702 | 55.01 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 748 | 55.05 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 17 | 3 |
| 756 | 55.06 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 17 | 5 |
| 771 | 55.06 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 772 | 55.07 | radiation | 1.0 | 14400 | < th | dose independent | sin | 16 | NA |
| 831 | 55.11 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 861 | 55.15 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 8 | 12 |
| 895 | 55.17 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 918 | 55.19 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 969 | 55.23 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 991 | 55.26 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 17 | 21 |
| 993 | 55.26 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 17 | 13 |