Os02g0512400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Glutaredoxin.
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Os02g0512400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Glutaredoxin.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 284.39 | 0.792 | 2.87 | -0.327 | 0.0102 | -14.3 | 1.1 | -65.6 | -0.0135 | 19.3 | 9.436 | 29 | -- | -- |
| 330.71 | 0.847 | 2.95 | -0.0483 | 0.13 | 3.01 | 2.55 | -- | -0.183 | 6.56 | 9.463 | 6 | -- | -- |
| 284.8 | 0.786 | 2.88 | -0.347 | 0.0701 | -14.3 | -- | -65.1 | -0.00572 | 13.7 | 9.5 | 28 | -- | -- |
| 286.56 | 0.788 | 3.02 | 0.203 | 0.0278 | 5.26 | -- | -- | -0.0239 | 19.6 | 9.422 | 6 | -- | -- |
| 285.04 | 0.786 | 2.87 | -0.365 | -- | -15.5 | -- | -69.7 | -0.0106 | -- | 9.5 | 28 | -- | -- |
| 315.67 | 0.833 | 3.03 | 0.118 | 0.0547 | -- | -0.855 | -- | -0.0489 | 10 | -- | -- | -- | -- |
| 317.38 | 0.834 | 3.03 | 0.0906 | 0.154 | -- | -- | -- | -0.0468 | 14.8 | -- | -- | -- | -- |
| 286.46 | 0.788 | 3.02 | 0.209 | -- | 5.53 | -- | -- | -0.00857 | -- | 9.428 | 6 | -- | -- |
| 287.28 | 0.789 | 3.03 | -- | 0.0813 | 5.37 | -- | -- | -0.0326 | 14 | 9.446 | 6 | -- | -- |
| 318.75 | 0.834 | 3.03 | 0.084 | -- | -- | -- | -- | -0.0508 | -- | -- | -- | -- | -- |
| 317.6 | 0.834 | 3.03 | -- | 0.152 | -- | -- | -- | -0.0569 | 14.8 | -- | -- | -- | -- |
| 287.67 | 0.79 | 3.03 | -- | -- | 5.4 | -- | -- | -0.0329 | -- | 9.437 | 6 | -- | -- |
| 318.94 | 0.834 | 3.03 | -- | -- | -- | -- | -- | -0.0601 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 283.34 | wind | 9.0 | 90 | > th | dose independent | rect. | 15 | 1 |
| 3 | 283.36 | wind | 9.0 | 90 | > th | dose dependent | rect. | 15 | 1 |
| 5 | 284.58 | wind | 9.0 | 90 | > th | dose dependent | rect. | 12 | 4 |
| 7 | 284.99 | wind | 9.0 | 90 | > th | dose independent | rect. | 12 | 4 |
| 11 | 285.13 | wind | 9.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 19 | 285.13 | wind | 9.0 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 31 | 285.67 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 20 | 2 |
| 60 | 287.78 | wind | 9.0 | 30 | > th | dose dependent | rect. | 15 | 11 |
| 78 | 287.80 | wind | 9.0 | 30 | > th | dose dependent | rect. | 15 | 7 |
| 92 | 288.28 | wind | 9.0 | 30 | > th | dose dependent | sin | 16 | NA |
| 138 | 290.59 | wind | 9.0 | 30 | > th | dose independent | rect. | 15 | 11 |
| 245 | 291.80 | atmosphere | 1005.0 | 30 | < th | dose independent | rect. | 20 | 2 |
| 271 | 292.40 | wind | 9.0 | 30 | > th | dose independent | sin | 16 | NA |
| 370 | 295.50 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 17 | 5 |
| 375 | 295.92 | wind | 9.0 | 30 | > th | dose dependent | rect. | 10 | 6 |
| 436 | 296.18 | atmosphere | 1000.0 | 30 | < th | dose independent | rect. | 16 | 7 |
| 469 | 296.66 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 18 |
| 566 | 297.23 | wind | 9.0 | 30 | > th | dose dependent | no | NA | NA |
| 633 | 297.51 | wind | 9.0 | 30 | < th | dose independent | sin | 16 | NA |
| 652 | 298.16 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 2 |
| 654 | 298.26 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 18 | 3 |
| 667 | 298.62 | humidity | 90.0 | 10 | < th | dose independent | rect. | 17 | 22 |
| 670 | 298.80 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 4 | 2 |
| 673 | 298.92 | wind | 3.0 | 90 | > th | dose dependent | rect. | 20 | 1 |
| 677 | 298.98 | humidity | 80.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 682 | 298.98 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 689 | 299.04 | wind | 1.0 | 10 | > th | dose independent | rect. | 20 | 2 |
| 726 | 299.53 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 20 | 5 |
| 727 | 299.53 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 20 | 1 |
| 728 | 299.53 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 20 | 5 |
| 730 | 299.59 | wind | 7.0 | 10 | < th | dose independent | rect. | 8 | 15 |
| 895 | 299.96 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 18 | 5 |
| 928 | 300.29 | wind | 3.0 | 30 | > th | dose dependent | rect. | 4 | 3 |
| 929 | 300.30 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 2 |
| 952 | 300.44 | wind | 9.0 | 30 | > th | dose independent | rect. | 10 | 6 |
| 994 | 300.58 | wind | 3.0 | 10 | > th | dose independent | rect. | 5 | 2 |