Os02g0510600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heavy metal transport/detoxification protein domain containing protein.
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Os02g0510600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Heavy metal transport/detoxification protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 163.29 | 0.6 | 10.1 | -2.53 | 0.65 | 3.51 | -1.83 | 2.01 | -1.43 | 12.2 | 9.343 | 275 | 16.2 | 22 |
| 166.65 | 0.601 | 10.1 | -2.72 | 0.601 | 3.46 | -1.84 | -- | -1.45 | 11.9 | 9.85 | 263 | 16.3 | 22.1 |
| 177.28 | 0.62 | 10.1 | -2.66 | 0.643 | 3.53 | -- | 1.44 | -1.48 | 12.1 | 9.474 | 270 | 16.3 | 22 |
| 177.44 | 0.62 | 10.1 | -2.86 | 0.649 | 3.48 | -- | -- | -1.51 | 12 | 9.974 | 265 | 16.3 | 22 |
| 198.65 | 0.656 | 10.1 | -2.84 | -- | 3.83 | -- | 0.926 | -1.54 | -- | 9.915 | 242 | 16.5 | 22.2 |
| 305.22 | 0.819 | 9.99 | -2.15 | 0.988 | -- | -1.45 | -- | -1.03 | 11.6 | -- | -- | -- | -- |
| 314.32 | 0.83 | 10 | -2.21 | 0.995 | -- | -- | -- | -1.04 | 11.5 | -- | -- | -- | -- |
| 199.26 | 0.657 | 10.1 | -2.88 | -- | 3.76 | -- | -- | -1.54 | -- | 10.11 | 241 | 16.6 | 22.2 |
| 369.82 | 0.896 | 9.98 | -- | 0.907 | 2.42 | -- | -- | -0.957 | 13.5 | 4.108 | 289 | 16.5 | 21.4 |
| 376.46 | 0.907 | 10 | -2.23 | -- | -- | -- | -- | -1.05 | -- | -- | -- | -- | -- |
| 442.56 | 0.984 | 9.94 | -- | 1.02 | -- | -- | -- | -0.791 | 11.6 | -- | -- | -- | -- |
| 408.29 | 0.941 | 10 | -- | -- | 2.81 | -- | -- | -1.09 | -- | 6.211 | 210 | 16.9 | 22.4 |
| 507.96 | 1.05 | 9.97 | -- | -- | -- | -- | -- | -0.8 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 165.59 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 22 |
| 23 | 187.77 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 20 |
| 41 | 191.39 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 16 |
| 43 | 192.50 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 17 |
| 46 | 194.01 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 54 | 194.64 | temperature | 20 | 10 | > th | dose dependent | rect. | 19 | 20 |
| 68 | 197.24 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 17 |
| 76 | 198.24 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 19 |
| 105 | 200.81 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 14 |
| 109 | 200.92 | temperature | 15 | 90 | > th | dose dependent | sin | 3 | NA |
| 112 | 201.04 | temperature | 25 | 270 | > th | dose independent | rect. | 17 | 20 |
| 114 | 201.23 | temperature | 15 | 10 | > th | dose dependent | sin | 2 | NA |
| 118 | 201.33 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 20 |
| 174 | 203.68 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 17 |
| 187 | 204.21 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 20 |
| 233 | 206.09 | temperature | 30 | 90 | < th | dose dependent | sin | 4 | NA |
| 239 | 206.30 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 243 | 206.38 | temperature | 25 | 270 | > th | dose dependent | sin | 9 | NA |
| 249 | 206.52 | temperature | 30 | 10 | < th | dose dependent | sin | 1 | NA |
| 298 | 208.20 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 356 | 209.71 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 423 | 212.00 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 438 | 212.44 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 441 | 212.63 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 450 | 212.88 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 497 | 214.13 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 507 | 214.46 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 509 | 214.46 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 519 | 214.66 | temperature | 20 | 10 | > th | dose dependent | rect. | 16 | 23 |
| 553 | 215.58 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 8 |
| 662 | 217.67 | temperature | 25 | 270 | < th | dose independent | rect. | 23 | 21 |
| 666 | 217.70 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 694 | 218.18 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 740 | 219.01 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 767 | 219.62 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 20 |
| 797 | 220.27 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 896 | 222.05 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 7 |
| 978 | 223.68 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 11 |