Os02g0510300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0510300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.93 | 0.23 | 10.2 | 0.763 | 0.319 | -0.818 | -0.535 | -1.6 | 0.235 | 3.81 | 25.18 | 1361 | -- | -- |
| 26.32 | 0.239 | 10.2 | 0.472 | 0.376 | -0.617 | -0.482 | -- | 0.188 | 3.98 | 30.89 | 1877 | -- | -- |
| 24.51 | 0.231 | 10.2 | 0.765 | 0.356 | -0.785 | -- | -1.53 | 0.239 | 3.49 | 25.3 | 1734 | -- | -- |
| 26.38 | 0.241 | 10.2 | 0.52 | 0.59 | -0.77 | -- | -- | 0.198 | 2.93 | 32.27 | 3246 | -- | -- |
| 29.5 | 0.253 | 10.2 | 0.719 | -- | -0.81 | -- | -1.39 | 0.219 | -- | 25.72 | 2596 | -- | -- |
| 32.86 | 0.269 | 10.2 | 0.679 | 0.357 | -- | -0.418 | -- | 0.319 | 3.63 | -- | -- | -- | -- |
| 33.35 | 0.27 | 10.2 | 0.686 | 0.353 | -- | -- | -- | 0.322 | 3.37 | -- | -- | -- | -- |
| 31.85 | 0.263 | 10.2 | 0.481 | -- | -0.679 | -- | -- | 0.153 | -- | 26.74 | 2616 | -- | -- |
| 29.14 | 0.251 | 10.3 | -- | 0.318 | -0.691 | -- | -- | 0.0693 | 3.57 | 100.4 | 40754 | -- | -- |
| 40.39 | 0.297 | 10.2 | 0.701 | -- | -- | -- | -- | 0.331 | -- | -- | -- | -- | -- |
| 45.76 | 0.316 | 10.2 | -- | 0.367 | -- | -- | -- | 0.245 | 3.36 | -- | -- | -- | -- |
| 35.38 | 0.277 | 10.3 | -- | -- | -0.681 | -- | -- | 0.0492 | -- | 100.2 | 47520 | -- | -- |
| 53.35 | 0.341 | 10.2 | -- | -- | -- | -- | -- | 0.253 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.66 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 3 | 22.80 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 4 | 22.81 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 3 |
| 11 | 22.83 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 3 |
| 14 | 22.86 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 1 |
| 77 | 23.29 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 7 |
| 173 | 23.53 | temperature | 25 | 4320 | > th | dose independent | rect. | 21 | 4 |
| 220 | 23.60 | temperature | 25 | 1440 | < th | dose dependent | sin | 10 | NA |
| 327 | 23.73 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 461 | 23.84 | temperature | 30 | 270 | < th | dose dependent | rect. | 12 | 22 |
| 500 | 23.88 | temperature | 25 | 1440 | < th | dose dependent | rect. | 10 | 21 |
| 647 | 23.98 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 667 | 24.00 | temperature | 25 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 744 | 24.06 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 806 | 24.11 | temperature | 15 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 808 | 24.12 | temperature | 10 | 1440 | > th | dose dependent | sin | 9 | NA |
| 860 | 24.16 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 979 | 24.25 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 996 | 24.27 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |