Os02g0510200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Acetohydroxyacid synthase.
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Os02g0510200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Acetohydroxyacid synthase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 48.91 | 0.329 | 13.9 | -0.456 | 0.817 | 1.79 | 0.638 | 2.28 | -0.438 | 1.93 | 15.27 | 8 | -- | -- |
| 52.09 | 0.339 | 14 | -0.786 | 0.794 | 1.8 | -0.00248 | -- | -0.523 | 1.77 | 15.27 | 8 | -- | -- |
| 49.93 | 0.332 | 13.9 | -0.566 | 0.801 | 1.74 | -- | 1.52 | -0.463 | 1.81 | 15.66 | 7 | -- | -- |
| 51.83 | 0.335 | 14 | -0.781 | 0.807 | 1.63 | -- | -- | -0.524 | 1.79 | 17.22 | 3 | -- | -- |
| 58.51 | 0.356 | 13.9 | -0.489 | -- | 1.3 | -- | 1.56 | -0.399 | -- | 14.7 | 1057 | -- | -- |
| 84.53 | 0.431 | 13.9 | -0.442 | 0.281 | -- | -0.284 | -- | -0.265 | 0.627 | -- | -- | -- | -- |
| 84.87 | 0.431 | 13.9 | -0.432 | 0.282 | -- | -- | -- | -0.264 | 0.788 | -- | -- | -- | -- |
| 60.51 | 0.362 | 14 | -0.813 | -- | 1.3 | -- | -- | -0.491 | -- | 15.34 | 1038 | -- | -- |
| 65.75 | 0.38 | 13.9 | -- | 0.702 | 1.26 | -- | -- | -0.396 | 1.7 | 19.1 | 3 | -- | -- |
| 89.83 | 0.443 | 13.9 | -0.422 | -- | -- | -- | -- | -0.259 | -- | -- | -- | -- | -- |
| 89.79 | 0.443 | 13.9 | -- | 0.275 | -- | -- | -- | -0.216 | 0.717 | -- | -- | -- | -- |
| 73.94 | 0.4 | 13.9 | -- | -- | 0.854 | -- | -- | -0.329 | -- | 20.4 | 1017 | -- | -- |
| 94.53 | 0.454 | 13.9 | -- | -- | -- | -- | -- | -0.212 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.59 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 4 | 49.01 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 6 | 49.05 | temperature | 15 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 12 | 49.64 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 13 | 49.65 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 17 | 50.04 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 26 | 50.40 | temperature | 15 | 270 | > th | dose dependent | sin | 8 | NA |
| 29 | 50.49 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 33 | 50.65 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 43 | 50.88 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 44 | 50.89 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 55 | 51.03 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 56 | 51.08 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 57 | 51.09 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 61 | 51.16 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 72 | 51.40 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 75 | 51.43 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 87 | 51.63 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 110 | 52.03 | temperature | 20 | 10 | > th | dose dependent | rect. | 2 | 23 |
| 112 | 52.04 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 124 | 52.12 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 126 | 52.14 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 128 | 52.18 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 133 | 52.29 | temperature | 25 | 4320 | > th | dose independent | rect. | 20 | 2 |
| 140 | 52.36 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 3 |
| 145 | 52.41 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 150 | 52.44 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 153 | 52.46 | temperature | 20 | 4320 | > th | dose dependent | rect. | 20 | 4 |
| 165 | 52.57 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 5 |
| 184 | 52.69 | temperature | 30 | 270 | < th | dose dependent | sin | 8 | NA |
| 202 | 52.87 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 227 | 53.04 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 12 |
| 243 | 53.14 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 17 |
| 290 | 53.33 | temperature | 20 | 1440 | > th | dose dependent | sin | 8 | NA |
| 488 | 54.03 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 503 | 54.07 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 19 |
| 722 | 54.53 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 823 | 54.71 | temperature | 20 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 835 | 54.74 | temperature | 10 | 1440 | > th | dose dependent | sin | 7 | NA |
| 879 | 54.82 | temperature | 25 | 4320 | < th | dose independent | rect. | 18 | 14 |
| 930 | 54.90 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 996 | 54.97 | temperature | 20 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 1000 | 54.98 | temperature | 25 | 4320 | > th | dose independent | rect. | 18 | 14 |