Os02g0497700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ras-GTPase-activating protein SH3-domain binding protein-like.
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Os02g0497700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ras-GTPase-activating protein SH3-domain binding protein-like.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.99 | 0.235 | 9.89 | 0.554 | 0.564 | 0.406 | -0.508 | -0.649 | 0.316 | 13 | 91.77 | 303 | -- | -- |
| 25.44 | 0.235 | 9.89 | 0.533 | 0.552 | 0.399 | -0.476 | -- | 0.307 | 12.8 | 92.24 | 354 | -- | -- |
| 25.89 | 0.237 | 9.89 | 0.541 | 0.547 | 0.471 | -- | -0.581 | 0.313 | 13 | 92.67 | 349 | -- | -- |
| 26.28 | 0.239 | 9.89 | 0.519 | 0.554 | 0.453 | -- | -- | 0.31 | 13 | 92.46 | 347 | -- | -- |
| 36.16 | 0.28 | 9.9 | 0.554 | -- | 0.66 | -- | -0.621 | 0.321 | -- | 76.78 | 946 | -- | -- |
| 27.56 | 0.246 | 9.9 | 0.566 | 0.527 | -- | -0.507 | -- | 0.255 | 12.1 | -- | -- | -- | -- |
| 28.68 | 0.251 | 9.9 | 0.546 | 0.528 | -- | -- | -- | 0.253 | 12.1 | -- | -- | -- | -- |
| 36.86 | 0.283 | 9.89 | 0.477 | -- | 0.651 | -- | -- | 0.318 | -- | 79 | 941 | -- | -- |
| 33.17 | 0.268 | 9.9 | -- | 0.56 | 0.493 | -- | -- | 0.259 | 13.3 | 91.41 | 354 | -- | -- |
| 46.25 | 0.318 | 9.91 | 0.529 | -- | -- | -- | -- | 0.245 | -- | -- | -- | -- | -- |
| 36.54 | 0.283 | 9.91 | -- | 0.521 | -- | -- | -- | 0.192 | 12.1 | -- | -- | -- | -- |
| 42.76 | 0.305 | 9.9 | -- | -- | 0.698 | -- | -- | 0.283 | -- | 82 | 943 | -- | -- |
| 53.64 | 0.342 | 9.92 | -- | -- | -- | -- | -- | 0.187 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.57 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 23 | 12 |
| 4 | 23.66 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 6 | 23 |
| 5 | 23.70 | temperature | 30.0 | 90 | < th | dose dependent | sin | 6 | NA |
| 7 | 23.76 | temperature | 20.0 | 90 | > th | dose dependent | sin | 7 | NA |
| 10 | 23.78 | temperature | 10.0 | 90 | > th | dose dependent | sin | 6 | NA |
| 38 | 24.02 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 7 |
| 43 | 24.07 | temperature | 15.0 | 90 | > th | dose independent | rect. | 6 | 22 |
| 48 | 24.07 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 13 |
| 50 | 24.08 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 19 |
| 54 | 24.12 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 9 |
| 55 | 24.12 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 18 | 17 |
| 58 | 24.14 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 1 |
| 67 | 24.16 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 4 | 22 |
| 86 | 24.23 | temperature | 25.0 | 10 | < th | dose independent | rect. | 5 | 7 |
| 92 | 24.24 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 11 |
| 103 | 24.27 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 6 | 23 |
| 131 | 24.34 | humidity | 90.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 151 | 24.37 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 174 | 24.43 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 1 |
| 192 | 24.47 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 5 | 7 |
| 196 | 24.48 | temperature | 25.0 | 30 | < th | dose independent | rect. | 5 | 2 |
| 199 | 24.48 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 5 | 13 |
| 209 | 24.50 | temperature | 25.0 | 10 | < th | dose independent | rect. | 5 | 13 |
| 230 | 24.53 | temperature | 25.0 | 90 | > th | dose independent | rect. | 23 | 14 |
| 251 | 24.57 | wind | 9.0 | 30 | < th | dose dependent | rect. | 6 | 23 |
| 253 | 24.58 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 12 |
| 255 | 24.58 | wind | 7.0 | 30 | < th | dose independent | rect. | 6 | 23 |
| 349 | 24.70 | humidity | 90.0 | 30 | > th | dose independent | rect. | 5 | 7 |
| 369 | 24.73 | temperature | 15.0 | 90 | > th | dose independent | rect. | 18 | 10 |
| 429 | 24.80 | temperature | 25.0 | 90 | > th | dose independent | sin | 6 | NA |
| 433 | 24.80 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 6 | 5 |
| 440 | 24.80 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 6 | 22 |
| 451 | 24.82 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 10 | 5 |
| 461 | 24.83 | humidity | 90.0 | 30 | > th | dose independent | rect. | 5 | 13 |
| 462 | 24.83 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 5 | 1 |
| 480 | 24.84 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 5 | 5 |
| 482 | 24.84 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 22 | 11 |
| 492 | 24.85 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 18 | 10 |
| 499 | 24.85 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 6 | 8 |
| 512 | 24.86 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 1 |
| 528 | 24.87 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 6 | 23 |
| 567 | 24.89 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 22 | 17 |
| 570 | 24.89 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 23 | 19 |
| 584 | 24.90 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 22 | 14 |
| 587 | 24.90 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 22 | 17 |
| 592 | 24.91 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 19 | 10 |
| 608 | 24.92 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 642 | 24.94 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 5 | 1 |
| 655 | 24.95 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 658 | 24.95 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 691 | 24.97 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 6 | 23 |
| 705 | 24.97 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 6 | 23 |
| 714 | 24.98 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 10 |
| 761 | 25.01 | temperature | 25.0 | 90 | < th | dose independent | sin | 5 | NA |
| 762 | 25.01 | wind | 7.0 | 30 | < th | dose independent | rect. | 5 | 1 |
| 764 | 25.01 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 1 |
| 767 | 25.01 | humidity | 50.0 | 30 | > th | dose independent | rect. | 5 | 1 |
| 771 | 25.01 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 5 | 1 |
| 773 | 25.01 | radiation | 20.0 | 30 | < th | dose independent | rect. | 5 | 1 |
| 800 | 25.02 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 5 | 1 |
| 803 | 25.02 | temperature | 25.0 | 270 | > th | dose independent | rect. | 17 | 19 |
| 806 | 25.02 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 808 | 25.02 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 5 | 1 |
| 819 | 25.02 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 4 | 19 |
| 824 | 25.03 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 860 | 25.05 | wind | 1.0 | 10 | > th | dose independent | rect. | 5 | 1 |
| 861 | 25.05 | wind | 7.0 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 863 | 25.05 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 866 | 25.05 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 871 | 25.05 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 876 | 25.05 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 877 | 25.05 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 878 | 25.05 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 885 | 25.05 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 23 |
| 892 | 25.05 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 6 |
| 893 | 25.05 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 3 | 8 |
| 897 | 25.05 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 15 | 13 |
| 909 | 25.05 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 936 | 25.07 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 17 | 11 |
| 956 | 25.08 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 5 |
| 961 | 25.08 | wind | 9.0 | 90 | < th | dose dependent | rect. | 18 | 10 |
| 971 | 25.09 | wind | 7.0 | 90 | < th | dose independent | rect. | 18 | 10 |
| 977 | 25.09 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 12 | 3 |