Os02g0494600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0494600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 284.48 | 0.792 | 7.1 | 0.211 | 0.319 | 1.41 | 0.35 | 1.88 | -1.02 | 15 | 69.95 | 6206 | -- | -- |
| 289.53 | 0.792 | 7.1 | 0.153 | 0.299 | 1.47 | 0.376 | -- | -1.06 | 15.1 | 69.8 | 6205 | -- | -- |
| 284.85 | 0.786 | 7.1 | 0.221 | 0.321 | 1.4 | -- | 1.93 | -1.01 | 14.7 | 69.86 | 6212 | -- | -- |
| 290.08 | 0.793 | 7.1 | 0.124 | 0.3 | 1.51 | -- | -- | -1.05 | 14.7 | 69.51 | 6205 | -- | -- |
| 290.7 | 0.794 | 7.1 | 0.205 | -- | 1.48 | -- | 1.77 | -1.03 | -- | 69.98 | 6212 | -- | -- |
| 322.43 | 0.842 | 7.06 | 0.0405 | 0.406 | -- | 0.374 | -- | -0.867 | 15.8 | -- | -- | -- | -- |
| 322.82 | 0.841 | 7.06 | 0.0462 | 0.407 | -- | -- | -- | -0.865 | 15.6 | -- | -- | -- | -- |
| 295.13 | 0.8 | 7.1 | 0.117 | -- | 1.57 | -- | -- | -1.06 | -- | 69.52 | 6205 | -- | -- |
| 290.52 | 0.794 | 7.1 | -- | 0.296 | 1.49 | -- | -- | -1.06 | 14.7 | 69.65 | 6205 | -- | -- |
| 332.05 | 0.851 | 7.06 | 0.0291 | -- | -- | -- | -- | -0.876 | -- | -- | -- | -- | -- |
| 322.87 | 0.841 | 7.06 | -- | 0.406 | -- | -- | -- | -0.87 | 15.6 | -- | -- | -- | -- |
| 295.52 | 0.801 | 7.1 | -- | -- | 1.56 | -- | -- | -1.07 | -- | 69.89 | 6205 | -- | -- |
| 332.08 | 0.851 | 7.06 | -- | -- | -- | -- | -- | -0.879 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 275.93 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 4 | 276.63 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 5 | 277.00 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 11 | 2 |
| 12 | 277.48 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 13 | 277.48 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 14 | 277.55 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 15 | 277.55 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 19 | 277.78 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 11 | 6 |
| 54 | 278.13 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 8 | 8 |
| 60 | 278.20 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 19 | 21 |
| 64 | 278.22 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 5 | 11 |
| 66 | 278.22 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 23 | 17 |
| 148 | 278.56 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 6 |
| 150 | 278.60 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 11 | 22 |
| 153 | 278.65 | humidity | 60.0 | 14400 | > th | dose independent | sin | 1 | NA |
| 157 | 278.66 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 8 | 5 |
| 160 | 278.71 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 11 | 9 |
| 162 | 278.72 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 11 | 14 |
| 166 | 278.73 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 11 | 19 |
| 182 | 278.80 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 22 |
| 186 | 278.84 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 9 |
| 205 | 278.93 | humidity | 60.0 | 14400 | < th | dose independent | sin | 1 | NA |
| 304 | 279.22 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 8 | 16 |
| 311 | 279.23 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 8 | 21 |
| 374 | 279.31 | humidity | 60.0 | 14400 | > th | dose independent | no | NA | NA |
| 420 | 279.33 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 23 |
| 477 | 279.49 | humidity | 70.0 | 14400 | < th | dose dependent | sin | 2 | NA |
| 527 | 279.60 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 6 |
| 560 | 279.67 | humidity | 60.0 | 14400 | < th | dose independent | no | NA | NA |
| 649 | 279.81 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 23 |
| 655 | 279.83 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 10 | 23 |
| 667 | 279.93 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 762 | 280.04 | humidity | 70.0 | 14400 | < th | dose dependent | no | NA | NA |
| 832 | 280.10 | wind | 9.0 | 30 | < th | dose independent | rect. | 23 | 23 |
| 905 | 280.46 | humidity | 70.0 | 14400 | > th | dose independent | sin | 9 | NA |
| 946 | 280.60 | humidity | 70.0 | 14400 | < th | dose independent | sin | 9 | NA |