Os02g0481900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Putative 5-3 exonuclease domain containing protein.
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Os02g0481900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Putative 5-3 exonuclease domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.68 | 0.381 | 8.75 | -1.2 | 0.613 | -0.879 | 1 | 2.52 | 0.692 | 1.79 | 24.11 | 3068 | -- | -- |
| 68.93 | 0.387 | 8.7 | -0.98 | 0.65 | -1.6 | 0.881 | -- | 0.724 | 1.89 | 21.65 | 3324 | -- | -- |
| 69.4 | 0.388 | 8.75 | -1.17 | 0.627 | -0.938 | -- | 2.25 | 0.708 | 1.86 | 23.28 | 3163 | -- | -- |
| 70.99 | 0.392 | 8.66 | -0.905 | 0.642 | -1.77 | -- | -- | 0.838 | 1.82 | 19.99 | 3167 | -- | -- |
| 91.6 | 0.446 | 8.74 | -1.19 | -- | -1.06 | -- | 2.17 | 0.676 | -- | 25.4 | 2598 | -- | -- |
| 97.31 | 0.462 | 8.6 | -0.188 | 0.639 | -- | 0.957 | -- | 1.1 | 1.79 | -- | -- | -- | -- |
| 100.88 | 0.47 | 8.61 | -0.218 | 0.64 | -- | -- | -- | 1.09 | 1.89 | -- | -- | -- | -- |
| 93.4 | 0.45 | 8.67 | -0.977 | -- | -1.71 | -- | -- | 0.796 | -- | 21.04 | 3699 | -- | -- |
| 86 | 0.432 | 8.62 | -- | 0.627 | -1.21 | -- | -- | 1.02 | 1.74 | 19.1 | 3052 | -- | -- |
| 125.67 | 0.524 | 8.6 | -0.192 | -- | -- | -- | -- | 1.11 | -- | -- | -- | -- | -- |
| 102.13 | 0.473 | 8.6 | -- | 0.636 | -- | -- | -- | 1.12 | 1.88 | -- | -- | -- | -- |
| 107.18 | 0.482 | 8.63 | -- | -- | -0.961 | -- | -- | 0.954 | -- | 23.09 | 2438 | -- | -- |
| 126.64 | 0.525 | 8.59 | -- | -- | -- | -- | -- | 1.13 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 56.53 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 22 |
| 3 | 56.56 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 22 |
| 11 | 56.80 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 16 |
| 17 | 56.88 | wind | 9 | 43200 | < th | dose independent | rect. | 8 | 15 |
| 22 | 56.93 | wind | 9 | 43200 | < th | dose independent | rect. | 8 | 13 |
| 32 | 57.02 | wind | 9 | 43200 | > th | dose independent | rect. | 14 | 18 |
| 37 | 57.06 | wind | 9 | 43200 | < th | dose independent | sin | 23 | NA |
| 45 | 57.12 | wind | 9 | 43200 | > th | dose independent | sin | 22 | NA |
| 48 | 57.13 | wind | 7 | 43200 | > th | dose dependent | rect. | 9 | 21 |
| 52 | 57.16 | wind | 9 | 43200 | < th | dose independent | rect. | 14 | 18 |
| 59 | 57.22 | wind | 7 | 43200 | > th | dose dependent | rect. | 9 | 6 |
| 67 | 57.29 | wind | 9 | 43200 | < th | dose independent | rect. | 4 | 19 |
| 83 | 57.36 | wind | 7 | 43200 | > th | dose dependent | rect. | 9 | 16 |
| 102 | 57.44 | wind | 7 | 43200 | > th | dose dependent | sin | 22 | NA |
| 106 | 57.47 | wind | 9 | 43200 | < th | dose independent | rect. | 8 | 10 |
| 110 | 57.50 | wind | 9 | 43200 | > th | dose dependent | rect. | 14 | 17 |
| 111 | 57.51 | wind | 9 | 43200 | < th | dose independent | rect. | 24 | 23 |
| 115 | 57.52 | wind | 9 | 43200 | > th | dose independent | rect. | 4 | 19 |
| 156 | 57.67 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 6 |
| 157 | 57.67 | wind | 9 | 43200 | < th | dose independent | rect. | 9 | 6 |
| 164 | 57.69 | wind | 9 | 43200 | > th | dose independent | rect. | 8 | 10 |
| 182 | 57.74 | wind | 7 | 43200 | > th | dose independent | rect. | 16 | 23 |
| 195 | 57.79 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 21 |
| 196 | 57.79 | wind | 7 | 43200 | > th | dose dependent | rect. | 8 | 10 |
| 197 | 57.79 | wind | 7 | 43200 | > th | dose dependent | rect. | 4 | 19 |
| 198 | 57.80 | wind | 9 | 43200 | > th | dose independent | rect. | 24 | 23 |
| 224 | 57.87 | wind | 9 | 43200 | < th | dose independent | no | NA | NA |
| 248 | 57.91 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 22 |
| 254 | 57.93 | wind | 9 | 43200 | > th | dose independent | sin | 14 | NA |
| 268 | 57.95 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 23 |
| 271 | 57.96 | wind | 7 | 43200 | > th | dose independent | rect. | 4 | 11 |
| 277 | 57.97 | wind | 7 | 43200 | < th | dose independent | rect. | 20 | 21 |
| 284 | 57.99 | temperature | 20 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 286 | 57.99 | wind | 7 | 43200 | > th | dose independent | rect. | 3 | 13 |
| 305 | 58.02 | wind | 7 | 43200 | > th | dose independent | sin | 2 | NA |
| 306 | 58.02 | wind | 9 | 43200 | < th | dose independent | sin | 14 | NA |
| 345 | 58.08 | wind | 7 | 43200 | > th | dose independent | no | NA | NA |
| 397 | 58.16 | wind | 9 | 43200 | > th | dose dependent | sin | 17 | NA |
| 400 | 58.17 | temperature | 20 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 410 | 58.18 | wind | 7 | 43200 | < th | dose independent | sin | 2 | NA |
| 430 | 58.21 | wind | 7 | 43200 | > th | dose dependent | no | NA | NA |
| 433 | 58.21 | wind | 7 | 43200 | > th | dose dependent | rect. | 19 | 23 |
| 442 | 58.22 | wind | 7 | 43200 | > th | dose dependent | rect. | 4 | 14 |
| 526 | 58.33 | wind | 7 | 43200 | > th | dose dependent | rect. | 10 | 4 |
| 690 | 58.58 | wind | 7 | 43200 | > th | dose dependent | sin | 14 | NA |
| 823 | 58.90 | wind | 7 | 43200 | > th | dose independent | rect. | 16 | 15 |
| 866 | 59.01 | wind | 7 | 43200 | > th | dose dependent | rect. | 16 | 14 |