BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0481900 Os02g0481900|AK066344
(822 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G54490.1 | chr1:20350300-20356650 FORWARD LENGTH=948 506 e-143
AT1G75660.1 | chr1:28408289-28414825 FORWARD LENGTH=1021 366 e-101
AT5G42540.2 | chr5:17007513-17014534 FORWARD LENGTH=1024 362 e-100
>AT1G54490.1 | chr1:20350300-20356650 FORWARD LENGTH=948
Length = 947
Score = 506 bits (1302), Expect = e-143, Method: Compositional matrix adjust.
Identities = 315/766 (41%), Positives = 428/766 (55%), Gaps = 134/766 (17%)
Query: 1 MGIPSFYRWLVNRYPSIVSPAKESRPADG-----IVV-----------YDNLYLDMNQII 44
MG+P+FYRWL +RYP +S E P DG I V +DNLYLDMN II
Sbjct: 1 MGVPAFYRWLADRYPKSISDVVEEEPTDGGRGDLIPVDITRPNPNGFEFDNLYLDMNGII 60
Query: 45 HYSFHPQDQMNAGTDVCAPTTVSEVFESMFDYLDRLFRIVRPRRLLYLAVDGVAPCAKMN 104
H FHP+ + AP T +VF+SMF+Y+D LF +VRPR++LYLA+DGVAP AKMN
Sbjct: 61 HPCFHPEGK-------PAPATYDDVFKSMFEYIDHLFTLVRPRKILYLAIDGVAPRAKMN 113
Query: 105 GMRRGRRFAWASE---------------EEEMQKISEG----VSDPNVITPGTEFMEKIS 145
+R RRF A + E E Q +S D NVITPGT FM +S
Sbjct: 114 -QQRSRRFRAAKDAAEAEAEEERLRKDFEMEGQILSAKEKAETCDSNVITPGTPFMAILS 172
Query: 146 QALTYYIRARLNSSDPGWKHIMVILSDANVPGEGEHKIMSFIRAQRSMEGYDPNTRHCLF 205
AL YYI++RLN +PGW+++ VILSD+NVPGEGEHKIMS+IR QR++ G+DPNTRHCL+
Sbjct: 173 VALQYYIQSRLNH-NPGWRYVKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLY 231
Query: 206 GHDADLIMLALASHEVHFSILRE---------------------------DNSQLTEAD- 237
G DADLIML+LA+HEVHFSILRE S AD
Sbjct: 232 GLDADLIMLSLATHEVHFSILREVITYPGQQEKCFVCGQTGHFASDCPGKSGSNNAAADI 291
Query: 238 --PEKQYLFLNIWVLREYLEIELKILDPVCEPDIERLIDDFIFICFLMGNDFIPHIPSLE 295
+K+Y FLNIWVLREYL+ EL I DP + ER+IDDF+F+CF +GNDF+PH+P+LE
Sbjct: 292 PIHKKKYQFLNIWVLREYLQYELAIPDPPFMINFERIIDDFVFLCFFVGNDFLPHMPTLE 351
Query: 296 MKEYALDLLIEVYKTTFNKMGGYIVNIEKVKDKHAAYLEVSRLEIFFHQLSMYEEKIFLK 355
++E A++LL+ VY+ F MGGY+ + +V + R+E F +++ E+KIF K
Sbjct: 352 IREGAINLLMHVYRKEFTAMGGYLTDSGEVL--------LDRVEHFIQAVAVNEDKIFQK 403
Query: 356 RYELEQ------ESLKKSCRDVXXXXXXXXXXXXXXXXXXXFFNEERPYDKLRLGLPGWK 409
R ++Q E ++S RD E DK++LG PG+K
Sbjct: 404 RTRIKQSMDNNEEMKQRSRRDPSEVP------------------PEPIDDKIKLGEPGYK 445
Query: 410 SRFYREYFGIETSNEIGNLQNDMAQKYLEGLCWMLQYYLADVPSWSWYYPFYVAPFVSDL 469
R+Y E F E ++ DM KY+EGLCW+ +YY V SW W+YP++ APF SDL
Sbjct: 446 ERYYAEKFSTTNPEETEQIKQDMVLKYVEGLCWVCRYYYQGVCSWQWFYPYHYAPFASDL 505
Query: 470 KSNCRFEISFTVDKPLRPFDQLMAVLPLRSSCALPECYRKVMGRK-----EFDHPKLQAD 524
K+ EI+F + +P +PFDQLM LP SS ALP YRK+M +F + D
Sbjct: 506 KNLPDLEITFFIGEPFKPFDQLMGTLPAASSNALPGEYRKLMTDPSSPILKFYPADFELD 565
Query: 525 TIGKRFLWKCIS------EEELLQATKELDKELSMHEMRRNTPRQEKIFLQRNSNAQALA 578
GKRF W+ I+ E+ LL AT++L++ L++ E +RN+ + +++ A L
Sbjct: 566 MNGKRFAWQGIAKLPFIEEKLLLAATRKLEETLTVEEQQRNSVMLDLLYVHP---AHPLG 622
Query: 579 KVIVQLQT--SSCSPEQKLP--ID-SAISGLGG--WLSPDGLSNGFFC---SPLQNLQDI 628
+ I+Q P + LP ID ++ G+ G W S NGF SP+ L I
Sbjct: 623 QRILQYYHFYQHMPPHECLPWMIDPNSSQGMNGFLWFSE---RNGFQTRVDSPVNGLPCI 679
Query: 629 TNDQAISAMFFNPEAGNPIPRLLSNVKVPDKTVTEADISR-RLLWH 673
++A++ + P + I +PDK +T DI LWH
Sbjct: 680 EQNRALNVTYLCPAKHSHISEPPRGAIIPDKILTSVDIKPFPPLWH 725
>AT1G75660.1 | chr1:28408289-28414825 FORWARD LENGTH=1021
Length = 1020
Score = 366 bits (939), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/439 (46%), Positives = 262/439 (59%), Gaps = 86/439 (19%)
Query: 1 MGIPSFYRWLVNRYPSIVS---------------PAKESRPADGIVVYDNLYLDMNQIIH 45
MG+PSFYRWL +YP +V+ P S+P + YDNLYLDMN IIH
Sbjct: 1 MGVPSFYRWLAEKYPLLVADVIEEEPVEIEGIKIPVDTSKPNPNNLEYDNLYLDMNGIIH 60
Query: 46 YSFHPQDQMNAGTDVCAPTTVSEVFESMFDYLDRLFRIVRPRRLLYLAVDGVAPCAKMNG 105
FHP+D+ +PTT EVF+ MFDY+DRLF +VRPR+LLY+A+DGVAP AKMN
Sbjct: 61 PCFHPEDR-------PSPTTFEEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMN- 112
Query: 106 MRRGRRFAWASEEEEMQ-------------------KISEGVSDPNVITPGTEFMEKISQ 146
+R RRF A + + K+ V D NVITPGTEFM +S
Sbjct: 113 QQRSRRFRSAKDASDAAAEEERLREEFEREGRRLPPKVDSQVFDSNVITPGTEFMGVLSI 172
Query: 147 ALTYYIRARLNSSDPGWKHIMVILSDANVPGEGEHKIMSFIRAQRSMEGYDPNTRHCLFG 206
AL YY+ RLN D GWK+I VILSDANVPGEGEHKIMS+IR QR++ G+DPNTRHCL+G
Sbjct: 173 ALQYYVHLRLNH-DVGWKNIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYG 231
Query: 207 HDADLIMLALASHEVHFSILRE------------------DNSQLTEADPEKQ------- 241
DADLIML LA+HEVHFSILRE + E P+K+
Sbjct: 232 LDADLIMLGLATHEVHFSILREVVYTPGQQERCFLCGQMGHFASNCEGKPKKRAGESDEK 291
Query: 242 ----------YLFLNIWVLREYLEIELKILDPVCEPDIERLIDDFIFICFLMGNDFIPHI 291
Y FL+IWVLREYLE+E++I +P E D+ER++DDFIFICF +GNDF+PH+
Sbjct: 292 GDGNDFVKKPYQFLHIWVLREYLELEMRIPNPPFEIDLERIVDDFIFICFFVGNDFLPHM 351
Query: 292 PSLEMKEYALDLLIEVYKTTFNKMGGYIVNIEKVKDKHAAYLEVSRLEIFFHQLSMYEEK 351
P+LE++E A++LL+ VYK F GY+ + + R+E F + +E+K
Sbjct: 352 PTLEIREGAINLLMAVYKKEFRSFDGYLTD--------GCKPNLKRVEQFIQAVGSFEDK 403
Query: 352 IFLKRYELEQESLKKSCRD 370
IF KR Q ++ RD
Sbjct: 404 IFQKRAMQHQRQAERVKRD 422
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/303 (34%), Positives = 160/303 (52%), Gaps = 24/303 (7%)
Query: 399 DKLRLGLPGWKSRFYREYFGIETSNEIGNLQNDMAQKYLEGLCWMLQYYLADVPSWSWYY 458
DK++LG PGW+ R+Y E F + T E+ ++ D+ KY EGLCW++ YY+ V SW W+Y
Sbjct: 529 DKVKLGQPGWRERYYEEKFSVVTPEEMERVRKDVVLKYTEGLCWVMHYYMEGVCSWQWFY 588
Query: 459 PFYVAPFVSDLKSNCRFEISFTVDKPLRPFDQLMAVLPLRSSCALPECYRKVMGRK---- 514
P++ APF SDLK +I F + P +PF+QL+ V P SS ALPE YR +M
Sbjct: 589 PYHYAPFASDLKDLGEMDIKFELGTPFKPFNQLLGVFPAASSHALPERYRTLMTDPNSPI 648
Query: 515 -EFDHPKLQADTIGKRFLWKCIS------EEELLQATKELDKELSMHEMRRNTPRQEKIF 567
+F + D GKRF W+ I+ E LL+A E++ L+ E RRN+ + +F
Sbjct: 649 IDFYPTDFEVDMNGKRFSWQGIAKLPFIDERRLLEAVSEVEFTLTDEEKRRNSRMCDMLF 708
Query: 568 LQRNSNAQALAKVIVQLQTSSCSPEQKLPIDSAIS-------GLGGWLSP-DGLSN-GFF 618
+ + + LA+++ L + +D + G+ G+L+P G ++ F
Sbjct: 709 I---ATSHRLAELVFSLDNHCRQLSARERVDFKVKIKPKLSDGMNGYLTPCSGETHPPVF 765
Query: 619 CSPLQNLQDITNDQAISAMFFNPEAGNPIPRLLSNVKVPDKTVTEADIS-RRLLWHTYPG 677
SP++ ++DI +Q I ++ P+A I R V P KTV D+ LWH G
Sbjct: 766 RSPMEGMEDILTNQVICCIYRLPDAHEHITRPPPGVIFPKKTVDIGDLKPPPALWHEDNG 825
Query: 678 SRP 680
RP
Sbjct: 826 RRP 828
>AT5G42540.2 | chr5:17007513-17014534 FORWARD LENGTH=1024
Length = 1023
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/444 (46%), Positives = 266/444 (59%), Gaps = 96/444 (21%)
Query: 1 MGIPSFYRWLVNRYPSIVSPAKESRPAD----GIVV-------------YDNLYLDMNQI 43
MG+PSFYRWL+ RYP + E P + G+ + YDNLYLDMN I
Sbjct: 1 MGVPSFYRWLIQRYPLTIQEVIEEEPLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGI 60
Query: 44 IHYSFHPQDQMNAGTDVCAPTTVSEVFESMFDYLDRLFRIVRPRRLLYLAVDGVAPCAKM 103
IH FHP+D+ +PTT +EVF+ MFDY+DRLF +VRPR+LL++A+DGVAP AKM
Sbjct: 61 IHPCFHPEDK-------PSPTTFTEVFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKM 113
Query: 104 NGMRRGRRFAWASEEEEMQ-------------------KISEGVSDPNVITPGTEFMEKI 144
N +R RRF A + E K+ V D NVITPGTEFM +
Sbjct: 114 N-QQRARRFRAAKDAAEAAAEEEQLREEFEREGKKLPPKVDSQVFDSNVITPGTEFMATL 172
Query: 145 SQALTYYIRARLNSSDPGWKHIMVILSDANVPGEGEHKIMSFIRAQRSMEGYDPNTRHCL 204
S AL YYI RLNS DPGWK+I VILSDANVPGEGEHKIMS+IR ++ GY+PNT HCL
Sbjct: 173 SFALRYYIHVRLNS-DPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCL 231
Query: 205 FGHDADLIMLALASHEVHFSILRE------------------------------------ 228
+G DADLIML+LA+HE+HFSILRE
Sbjct: 232 YGLDADLIMLSLATHEIHFSILREVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEML 291
Query: 229 DNSQLTEAD--PEKQYLFLNIWVLREYLEIELKILDPVCEPDIERLIDDFIFICFLMGND 286
DN TEAD +K Y F+NIW+LREYLE +++I P + +++RLIDDFIFICF +GND
Sbjct: 292 DN---TEADVVVKKPYEFVNIWILREYLEHDMQI--PGAKKNLDRLIDDFIFICFFVGND 346
Query: 287 FIPHIPSLEMKEYALDLLIEVYKTTFNKMGGYIVNIEKVKDKHAAYLEVSRLEIFFHQLS 346
F+PH+P+LE++E A++LL+ VYK F Y+ + K L + +E F +
Sbjct: 347 FLPHMPTLEIREGAIELLMSVYKNKFRSAKKYLTDSSK--------LNLRNVERFIKAVG 398
Query: 347 MYEEKIFLKRYELEQESLKKSCRD 370
MYE +IF KR +++Q ++ RD
Sbjct: 399 MYENQIFQKRAQVQQRQSERFRRD 422
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 174/321 (54%), Gaps = 37/321 (11%)
Query: 399 DKLRLGLPGWKSRFYREYFGIETSNEIGNLQNDMAQKYLEGLCWMLQYYLADVPSWSWYY 458
DK++L GW+ R+Y E F ++ E+ ++ D+ KY EGLCW++ YY V SW+W+Y
Sbjct: 521 DKVKLNKVGWRERYYEEKFAAKSVEEMEQIRRDVVLKYTEGLCWIMHYYYHGVCSWNWFY 580
Query: 459 PFYVAPFVSDLKSNCRFEISFTVDKPLRPFDQLMAVLPLRSSCALPECYRKVMGR----- 513
P++ APF SDLK + +I F + P +PF+QL+AVLP S+ ALPECYR +M
Sbjct: 581 PYHYAPFASDLKGLEKLDIKFELGSPFKPFNQLLAVLPSASAHALPECYRSLMTNPDSPI 640
Query: 514 KEFDHPKLQADTIGKRFLWKCIS------EEELLQATKELDKELSMHEMRRNTPRQEKIF 567
+F + D GKR+ W+ IS E+ LL+A +++K L+ E+RRN+ + +F
Sbjct: 641 ADFYPADFEIDMNGKRYSWQGISKLPFVEEKRLLEAAAQVEKSLTNEEIRRNSALFDMLF 700
Query: 568 LQRNSNAQALAKVIVQL--QTSSCSPEQKLPI----------------DSAISGLGGWLS 609
+ + L ++I L +T++ S E++ I D G+ G+++
Sbjct: 701 V---VASHPLGELIRSLNSRTNNLSNEERATIIEKIDPGLSEHIQKFLDVCSDGMNGYIA 757
Query: 610 PDGLSN--GFFCSPLQNLQDITNDQAISAMFFNPE--AGNPIPRLLSNVKVPDKTVTEAD 665
G + FCS ++ ++D+ +Q I A++ PE G+ I + + +P KT++ D
Sbjct: 758 SCGGDSQPSCFCSTVEGMEDVLTNQVICAIYKLPEDIRGSEITHQIPRLAIPKKTISLVD 817
Query: 666 I-SRRLLWHTYPGSRPPPPIV 685
+ S LLWH R PP V
Sbjct: 818 LKSGGLLWHEDGDKRRAPPKV 838
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.137 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 17,294,771
Number of extensions: 742626
Number of successful extensions: 1970
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 1947
Number of HSP's successfully gapped: 8
Length of query: 822
Length of database: 11,106,569
Length adjustment: 107
Effective length of query: 715
Effective length of database: 8,173,057
Effective search space: 5843735755
Effective search space used: 5843735755
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 116 (49.3 bits)