Os02g0471300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : FAD dependent oxidoreductase family protein.
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Os02g0471300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : FAD dependent oxidoreductase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 151.54 | 0.578 | 6.94 | 0.286 | 0.821 | 2.33 | -2.16 | -1.73 | 0.766 | 1.85 | 19.7 | 3683 | 3.46 | -- |
| 157.41 | 0.584 | 6.91 | 0.649 | 0.846 | 2.52 | -2.17 | -- | 0.81 | 1.7 | 19.8 | 3693 | 3.72 | -- |
| 169.08 | 0.606 | 6.93 | 0.35 | 0.852 | 2.33 | -- | -1.61 | 0.776 | 2.24 | 19.74 | 3770 | 3.74 | -- |
| 173.3 | 0.613 | 6.87 | 0.702 | 0.874 | 2.53 | -- | -- | 0.869 | 2.04 | 19.7 | 3781 | 3.7 | -- |
| 192.3 | 0.646 | 7 | 0.0531 | -- | 2.49 | -- | -2.57 | 0.641 | -- | 19.71 | 3514 | 5.49 | -- |
| 293.86 | 0.804 | 6.7 | 2.13 | 0.891 | -- | -2.32 | -- | 1.59 | 3.15 | -- | -- | -- | -- |
| 310.34 | 0.825 | 6.69 | 2.18 | 0.907 | -- | -- | -- | 1.61 | 3.75 | -- | -- | -- | -- |
| 195.23 | 0.651 | 6.9 | 0.406 | -- | 3.17 | -- | -- | 0.71 | -- | 19.8 | 3680 | 7.02 | -- |
| 182.42 | 0.629 | 6.88 | -- | 0.86 | 2.82 | -- | -- | 0.789 | 2.23 | 19.65 | 3939 | 5.37 | -- |
| 355.75 | 0.881 | 6.69 | 2.22 | -- | -- | -- | -- | 1.63 | -- | -- | -- | -- | -- |
| 435.9 | 0.977 | 6.74 | -- | 0.949 | -- | -- | -- | 1.36 | 3.73 | -- | -- | -- | -- |
| 196.3 | 0.653 | 6.89 | -- | -- | 3.26 | -- | -- | 0.757 | -- | 19.66 | 3760 | 7.97 | -- |
| 485.79 | 1.03 | 6.75 | -- | -- | -- | -- | -- | 1.38 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 151.45 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 2 | 151.51 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 3 | 156.43 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 4 | 156.92 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 5 | 157.08 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 6 | 157.54 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 18 | 160.87 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 21 | 161.34 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 24 | 161.55 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 8 |
| 31 | 161.93 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 13 | 8 |
| 32 | 161.97 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 37 | 162.34 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 9 |
| 42 | 162.57 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 15 | 6 |
| 46 | 162.65 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 60 | 163.10 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 12 | 13 |
| 88 | 163.63 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 13 | 7 |
| 103 | 163.88 | atmosphere | 1015 | 43200 | > th | dose dependent | sin | 16 | NA |
| 107 | 163.93 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 6 |
| 130 | 164.44 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 14 | 3 |
| 131 | 164.45 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 13 | 4 |
| 171 | 165.08 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 193 | 165.50 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 12 |
| 203 | 165.60 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 207 | 165.70 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 13 |
| 213 | 165.77 | wind | 9 | 43200 | < th | dose independent | rect. | 9 | 6 |
| 214 | 165.77 | radiation | 1 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 229 | 166.07 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 234 | 166.17 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 12 | 3 |
| 246 | 166.29 | temperature | 30 | 720 | < th | dose dependent | rect. | 21 | 16 |
| 262 | 166.47 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 286 | 166.76 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 301 | 166.90 | temperature | 30 | 720 | < th | dose dependent | rect. | 21 | 14 |
| 302 | 166.91 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 11 | 6 |
| 321 | 167.06 | radiation | 10 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 377 | 167.53 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 387 | 167.68 | temperature | 30 | 720 | < th | dose dependent | sin | 7 | NA |
| 398 | 167.79 | radiation | 10 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 409 | 167.90 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 16 |
| 425 | 168.00 | temperature | 15 | 720 | > th | dose dependent | sin | 8 | NA |
| 427 | 168.01 | radiation | 30 | 43200 | < th | dose independent | sin | 11 | NA |
| 447 | 168.20 | temperature | 20 | 4320 | > th | dose independent | sin | 11 | NA |
| 476 | 168.38 | temperature | 20 | 4320 | < th | dose independent | sin | 11 | NA |
| 480 | 168.39 | wind | 7 | 43200 | > th | dose dependent | rect. | 10 | 4 |
| 486 | 168.45 | atmosphere | 1015 | 43200 | > th | dose independent | sin | 19 | NA |
| 492 | 168.49 | radiation | 30 | 4320 | < th | dose independent | rect. | 15 | 17 |
| 495 | 168.50 | radiation | 30 | 43200 | < th | dose independent | rect. | 16 | 18 |
| 506 | 168.63 | radiation | 30 | 43200 | < th | dose independent | rect. | 16 | 20 |
| 535 | 168.82 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 12 | 17 |
| 541 | 168.85 | radiation | 10 | 43200 | < th | dose independent | rect. | 17 | 11 |
| 550 | 168.89 | radiation | 10 | 43200 | < th | dose independent | rect. | 17 | 6 |
| 556 | 168.91 | radiation | 10 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 559 | 168.91 | radiation | 30 | 43200 | < th | dose independent | rect. | 18 | 16 |
| 565 | 168.93 | radiation | 30 | 43200 | < th | dose independent | rect. | 4 | 6 |
| 566 | 168.93 | radiation | 30 | 43200 | < th | dose independent | rect. | 2 | 8 |
| 572 | 168.94 | radiation | 30 | 43200 | < th | dose independent | rect. | 6 | 4 |
| 576 | 168.94 | radiation | 30 | 43200 | < th | dose independent | rect. | 22 | 12 |
| 623 | 169.13 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 12 | 17 |
| 711 | 169.48 | atmosphere | 1015 | 43200 | < th | dose independent | sin | 19 | NA |
| 739 | 169.60 | radiation | 10 | 43200 | < th | dose independent | rect. | 16 | 15 |
| 920 | 170.27 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 2 | 18 |
| 922 | 170.28 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 931 | 170.36 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 24 | 5 |
| 951 | 170.45 | radiation | 30 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 968 | 170.46 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 3 | 17 |
| 969 | 170.46 | radiation | 10 | 43200 | < th | dose independent | rect. | 12 | 21 |