BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0471300 Os02g0471300|AK110913
(419 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G15760.1 | chr4:8972785-8974548 REVERSE LENGTH=423 244 7e-65
AT4G38540.1 | chr4:18023187-18024827 FORWARD LENGTH=408 201 5e-52
AT5G05320.1 | chr5:1575093-1576679 REVERSE LENGTH=407 198 5e-51
AT2G29720.1 | chr2:12700592-12702289 REVERSE LENGTH=428 148 6e-36
AT2G35660.1 | chr2:14988499-14990320 FORWARD LENGTH=440 145 5e-35
AT4G15765.1 | chr4:8975783-8977211 REVERSE LENGTH=272 142 3e-34
>AT4G15760.1 | chr4:8972785-8974548 REVERSE LENGTH=423
Length = 422
Score = 244 bits (622), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 152/399 (38%), Positives = 215/399 (53%), Gaps = 20/399 (5%)
Query: 24 LATALALHRKGISSLVLERSEALRADGVAIGIHANGWRALEHLGVAAVLREATNAITAYR 83
LAT++ALHRKGI S+VLER+E +R++G IG +NGWRAL+ LGV LR ++ I R
Sbjct: 41 LATSIALHRKGIKSVVLERAEKVRSEGAGIGTLSNGWRALDQLGVGDRLRLNSSLIHKAR 100
Query: 84 SVWQLQNKTTLLPAR--KELRCLTRKDLVETLAKNLPAGTIRFGCRVAAVDEDSGSRCPV 141
++ K + E RC+ R DLVE L+ LP GTIRFG + ++++D + PV
Sbjct: 101 TMLIENGKKREFVSNIVDEARCIKRNDLVEALSDALPKGTIRFGSHIVSIEQDKTTLFPV 160
Query: 142 LTTEDGHTIKAKVLIGCDGANSVVAKYLGLGNPSELPRLAILGLASYPDGHPFGTEFLTI 201
+ +G++IKAKVLIGCDGANS+V+ YL L A+ G YP+GH F E L I
Sbjct: 161 VHLANGNSIKAKVLIGCDGANSIVSDYLQLNPKKAFACRAVRGFTKYPNGHGFPQEVLRI 220
Query: 202 AGDDLAVGRLPINDHLVHFFLSRRRHSTDMARDASAAREYVLEKLQECPADVVDMVRRCD 261
++ +GRLP+ D+ V +FL + + +D + + + D +MV+ C+
Sbjct: 221 KQGNVLIGRLPLTDNQVFWFLVHMQDNNHNGKDQESIANLCRKWADDLSEDWKEMVKICN 280
Query: 262 HASSLWTTTKVWYRPPWQVXXXXXXXXXXXXXVTVAGDAMHVMGPFIGQGGSSALEDAVV 321
S T T + YR P ++ VTVAGDAMHVMGPF+ QGGS+ALEDAVV
Sbjct: 281 VES--LTLTHLRYRAPSEI----MLGKFRRGTVTVAGDAMHVMGPFLAQGGSAALEDAVV 334
Query: 322 LARSLSSSRATVEXXXXXXXXXXXXXXXQPQVDGEMGAXXXXXXXXXXXXXXXLSLESFT 381
LAR L+ V + +D LS++++
Sbjct: 335 LARCLARK---VGPDHGDLLKDCSMKNIEEAID--------EYVDERRMRLLGLSVQTYL 383
Query: 382 VGTLLRTKSAVVRLV-CAVVMALLGTRSRRHADYDCGSL 419
G L+T S V+RL+ A+++ L G RH YDCG L
Sbjct: 384 TGRSLQTSSKVLRLMFIALLLLLFGRDQIRHTRYDCGRL 422
>AT4G38540.1 | chr4:18023187-18024827 FORWARD LENGTH=408
Length = 407
Score = 201 bits (512), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 126/309 (40%), Positives = 174/309 (56%), Gaps = 15/309 (4%)
Query: 24 LATALALHRKGISSLVLERSEALRADGVAIGIHANGWRALEHLGVAAVLREATNAITAYR 83
L+TA+ LHR GI S+VLE SE LRA G A N W+A+E LGV+ +R + + +
Sbjct: 19 LSTAVGLHRLGIRSMVLESSETLRATGFAFTTWFNAWKAMEALGVSQHIRSLHDRLEGW- 77
Query: 84 SVWQLQNKT----TLLPARKEL--RCLTRKDLVETLAKNLPAGTIRFGCRVAAVDEDSGS 137
V + T L P +E RC+ RK L+E LA LP TIRF +V + E SG
Sbjct: 78 VVGTISAGTPPTEMLFPESEEYESRCVQRKLLLEALAGELPEETIRFSSKVVHI-ELSGC 136
Query: 138 RCPVLTTEDGHTIKAKVLIGCDGANSVVAKYLGLGNPSELPRLAILGLASYPDGHPFGTE 197
V + DG +K KVL+GCDG SVV K+LG NP+ RLAI GL +P+GH FG
Sbjct: 137 YKKVHLS-DGTILKTKVLVGCDGVYSVVGKWLGFKNPATTARLAIRGLTHFPEGHGFGKR 195
Query: 198 FLTIAGDDLAVGRLPINDHLVHFFLSRRRHSTDMARDASAAREYVLEKLQECPADVVDMV 257
F GD + G +P + + V++FL+ D ++ +E+VL K+++ P ++ ++V
Sbjct: 196 FFQFYGDGVRSGFIPCDHNTVYWFLTHTSTDIDEETNSEILKEFVLNKIKDLPENIKNVV 255
Query: 258 RRCDHASSLWTTTKVWYRPPWQVXXXXXXXXXXXXXVTVAGDAMHVMGPFIGQGGSSALE 317
D S + + K YRPPW++ V VAGDA+H M P IGQGG SA+E
Sbjct: 256 ETTDLDSMVMSQLK--YRPPWEL----LWSNITKDNVCVAGDALHPMTPDIGQGGCSAME 309
Query: 318 DAVVLARSL 326
D V+LAR L
Sbjct: 310 DGVILARCL 318
>AT5G05320.1 | chr5:1575093-1576679 REVERSE LENGTH=407
Length = 406
Score = 198 bits (503), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 119/313 (38%), Positives = 176/313 (56%), Gaps = 24/313 (7%)
Query: 24 LATALALHRKGISSLVLERSEALRADGVAIGIHANGWRALEHLGVAAVLREATNAITAYR 83
LATAL LHR GI S+VLE SE LRA G A+ ++ N W+A+E LG++ +R +
Sbjct: 19 LATALGLHRLGIRSIVLESSEQLRATGFALSLYFNAWKAMEALGISQHIRSLGDRFQG-- 76
Query: 84 SVWQLQN-------KTTLLPARKE--LRCLTRKDLVETLAKNLPAGTIRFGCRVAAVDED 134
W ++ K L P +E +RC+ RK L++ LA LP GTIRF ++ + E
Sbjct: 77 --WVVRPISAGDPPKEMLFPESEEYEVRCVQRKLLLDALAGELPQGTIRFSSKLVHI-EL 133
Query: 135 SGSRCPVLTTEDGHTIKAKVLIGCDGANSVVAKYLGLGNPSELPRLAILGLASYPDGHPF 194
SG ++ DG +K KVL+GCDG SVV K+LG NP + R+AI G+A + GH
Sbjct: 134 SG-HYKMVHLSDGTILKTKVLVGCDGVKSVVGKWLGFKNPVKTSRVAIRGIAHFQTGHEL 192
Query: 195 GTEFLTIAGDDLAVGRLPINDHLVHFFLSRRRHSTDM-ARDASAAREYVLEKLQECPADV 253
G F G+ + G + + + V++FL+ STD+ ++ +++VL K+++ P ++
Sbjct: 193 GRRFFQFYGNGVRSGFISCDQNTVYWFLTHT--STDLDKKNHQKIKQFVLTKIKDLPDNI 250
Query: 254 VDMVRRCDHASSLWTTTKVWYRPPWQVXXXXXXXXXXXXXVTVAGDAMHVMGPFIGQGGS 313
++ D S + + YRPPW++ V VAGDA+H M P IGQGG
Sbjct: 251 KSILETTDLDSLV--MNPLMYRPPWEL----LWANIAKDNVCVAGDALHPMTPDIGQGGC 304
Query: 314 SALEDAVVLARSL 326
SA+ED V+LAR L
Sbjct: 305 SAMEDGVILARCL 317
>AT2G29720.1 | chr2:12700592-12702289 REVERSE LENGTH=428
Length = 427
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 100/313 (31%), Positives = 156/313 (49%), Gaps = 15/313 (4%)
Query: 24 LATALALHRKGISSLVLERSEALRADGVAIGIHANGWRALEHLGVAAVLR----EATNAI 79
LATA+ALHR GI S+VLE++E+LR G ++ + NGWR L+ + + LR E +
Sbjct: 55 LATAVALHRLGIRSVVLEQAESLRTGGASLTLSKNGWRVLDAISIGPQLRKQFLEMQGVV 114
Query: 80 TAYRSVWQLQN-KTTLLPARKELRCLTRKDLVETLAKNLPAGTIRFGCRVAAVDEDSGSR 138
+L++ K +E+R + R+ L+ETLA LP TIRF ++ ++ ++
Sbjct: 115 LKKEDGRELRSFKFKDNDQSQEVRGVERRVLLETLASQLPPQTIRFSSKLESIQSNANGD 174
Query: 139 CPVLTTEDGHTIKAKVLIGCDGANSVVAKYLGLGNPSELPRLAILGLASYPDGHPFGTEF 198
+L +DG A ++IGCDG S VA ++G P + A GL +P+G PF +
Sbjct: 175 T-LLQLKDGTRFLANIVIGCDGIRSKVATWMGFSEPKYVGYCAFRGLGFFPNGQPFQQKV 233
Query: 199 LTIAGDDLAVGRLPINDHLVHFFLSRRRHST-DMARDASAAREYVLEKLQECPADVVDMV 257
I G L G +P++ V++F++ S D + R+ E + P D+ +++
Sbjct: 234 NYIFGRGLRAGYVPVSATKVYWFITFNSPSLGPQMMDPAILRKEAKELVSTWPEDLQNLI 293
Query: 258 RRC-DHASSLWTTTKVWYRPPWQVXXXXXXXXXXXXXVTVAGDAMHVMGPFIGQGGSSAL 316
D A S W P V + GDA H M P +GQG AL
Sbjct: 294 DLTPDEAISRTPLADRWLWP-------GIAPSASKGRVVLVGDAWHPMTPNLGQGACCAL 346
Query: 317 EDAVVLARSLSSS 329
ED+V+LA L+S+
Sbjct: 347 EDSVLLANKLASA 359
>AT2G35660.1 | chr2:14988499-14990320 FORWARD LENGTH=440
Length = 439
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 155/313 (49%), Gaps = 15/313 (4%)
Query: 24 LATALALHRKGISSLVLERSEALRADGVAIGIHANGWRALEHLGVAAVLR----EATNAI 79
LATA++LHR GI S+VLE++E+LR G ++ + NGWR L+ + V LR E +
Sbjct: 57 LATAVSLHRLGIRSVVLEQAESLRTGGTSLTLFKNGWRVLDAISVGPQLRTQFLEIEGMV 116
Query: 80 TAYRSVWQLQN-KTTLLPARKELRCLTRKDLVETLAKNLPAGTIRFGCRVAAVDEDSGSR 138
+L++ K +E+R + R+ L+ETLA LP TIRF ++ ++ ++
Sbjct: 117 VKKEDGRELRSFKFKDDDQSQEVRAVERRVLLETLASQLPPQTIRFSSKLESIQSNANGD 176
Query: 139 CPVLTTEDGHTIKAKVLIGCDGANSVVAKYLGLGNPSELPRLAILGLASYPDGHPFGTEF 198
+L DG + A+++IGCDG S VA ++G P + A GL YP+G PF +
Sbjct: 177 T-LLQLGDGTRLLAQIVIGCDGIRSKVATWMGFSEPKYVGHCAYRGLGFYPNGQPFQKKV 235
Query: 199 LTIAGDDLAVGRLPINDHLVHFFLSRRRHST-DMARDASAAREYVLEKLQECPADVVDMV 257
I G + G +P++ V++F+ S D + ++ E + P D+ +++
Sbjct: 236 NYIYGKGIRAGYVPVSTTKVYWFICFNSPSLGPKITDPAILKKQAKELVSTWPEDLQNLI 295
Query: 258 RRC-DHASSLWTTTKVWYRPPWQVXXXXXXXXXXXXXVTVAGDAMHVMGPFIGQGGSSAL 316
D S W P V + GDA H M P +GQG AL
Sbjct: 296 DLTPDETISRTPLVDRWLWP-------GIAPPASKGRVVLVGDAWHPMTPNLGQGACCAL 348
Query: 317 EDAVVLARSLSSS 329
ED+VVLA L+++
Sbjct: 349 EDSVVLANKLANA 361
>AT4G15765.1 | chr4:8975783-8977211 REVERSE LENGTH=272
Length = 271
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/260 (36%), Positives = 135/260 (51%), Gaps = 39/260 (15%)
Query: 24 LATALALHRKGISSLVLERSEALRADGVAIGIHANGWRALEHLGVAAVLREATNAITAYR 83
LAT+LALHRKGI S+VLERSE++R++G A I VL E
Sbjct: 16 LATSLALHRKGIKSVVLERSESVRSEGAAFWIRD-------------VLIEKG------- 55
Query: 84 SVWQLQNKTTLLPARK-ELRCLTRKDLVETLAKNLPAGTIRFGCRVAAVDEDSGSRCPVL 142
++ + ++ PA E+R + R DLV LA LP GT+R GC + +V D P++
Sbjct: 56 ----IKRRESVGPASYGEVRGVLRNDLVRALAHALPLGTLRLGCHILSVKLDETKSFPIV 111
Query: 143 TTEDGHTIKAKVLIGCDGANSVVAKYLGLGNPSELPRLAILGLASYPDGHPFGTEFLTIA 202
VLIGCDG+NSVV+++LGL +L AI G +YPD H F EF+ I
Sbjct: 112 ----------HVLIGCDGSNSVVSRFLGLNPTKDLGSRAIRGFTNYPDDHGFRQEFIRIK 161
Query: 203 GDDLAVGRLPINDHLVHFFLSRRR--HSTDMARDASAAREYVLEKLQECPADVVDMVRRC 260
D++ GRLPI LV +F+ R ++ ++ L ++E + +MV+ C
Sbjct: 162 MDNVVSGRLPITHKLVFWFVVLRNCPQDSNFLKNQEDIARLALASVREFSEEWKEMVKNC 221
Query: 261 DHASSLWTTTKVWYRPPWQV 280
D SL+ ++ YR PW V
Sbjct: 222 D-MDSLY-INRLRYRAPWDV 239
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.133 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,379,086
Number of extensions: 267738
Number of successful extensions: 566
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 551
Number of HSP's successfully gapped: 6
Length of query: 419
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 318
Effective length of database: 8,337,553
Effective search space: 2651341854
Effective search space used: 2651341854
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)