Os02g0467300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0467300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 667.87 | 1.21 | 4.02 | -0.123 | 0.823 | 8.13 | -0.305 | 12 | 0.318 | 2.97 | 8.501 | 306 | -- | -- |
| 683.34 | 1.22 | 3.93 | -0.0464 | 0.801 | 6.88 | 0.407 | -- | 0.364 | 2.66 | 8.703 | 359 | -- | -- |
| 668.15 | 1.2 | 4.02 | -0.115 | 0.821 | 8.17 | -- | 12.3 | 0.319 | 3.07 | 8.506 | 305 | -- | -- |
| 673.09 | 1.21 | 3.96 | -0.161 | 0.789 | 5.44 | -- | -- | 0.402 | 3.08 | 8.6 | 326 | -- | -- |
| 705.54 | 1.24 | 4.02 | -0.104 | -- | 8.05 | -- | 13.4 | 0.328 | -- | 8.572 | 325 | -- | -- |
| 768.5 | 1.3 | 4 | -0.666 | 0.655 | -- | -0.142 | -- | 0.171 | 2.17 | -- | -- | -- | -- |
| 768.55 | 1.3 | 4 | -0.662 | 0.657 | -- | -- | -- | 0.172 | 2.3 | -- | -- | -- | -- |
| 702.34 | 1.23 | 3.97 | -0.228 | -- | 5.11 | -- | -- | 0.334 | -- | 8.8 | 559 | -- | -- |
| 673.92 | 1.21 | 3.95 | -- | 0.821 | 5.45 | -- | -- | 0.375 | 3.06 | 8.5 | 326 | -- | -- |
| 794.16 | 1.32 | 4 | -0.635 | -- | -- | -- | -- | 0.188 | -- | -- | -- | -- | -- |
| 780.11 | 1.31 | 3.99 | -- | 0.644 | -- | -- | -- | 0.245 | 2.28 | -- | -- | -- | -- |
| 703.4 | 1.24 | 3.95 | -- | -- | 4.94 | -- | -- | 0.377 | -- | 8.704 | 559 | -- | -- |
| 804.78 | 1.32 | 3.98 | -- | -- | -- | -- | -- | 0.258 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 662.79 | wind | 7 | 270 | > th | dose dependent | rect. | 11 | 18 |
| 20 | 664.64 | wind | 7 | 720 | > th | dose dependent | rect. | 12 | 1 |
| 27 | 667.54 | radiation | 1 | 4320 | < th | dose dependent | rect. | 3 | 2 |
| 29 | 667.81 | wind | 9 | 720 | > th | dose dependent | rect. | 12 | 4 |
| 30 | 667.81 | radiation | 1 | 4320 | < th | dose dependent | rect. | 24 | 5 |
| 32 | 667.95 | wind | 9 | 270 | > th | dose independent | rect. | 12 | 14 |
| 40 | 668.04 | wind | 9 | 720 | > th | dose independent | rect. | 12 | 4 |
| 52 | 668.51 | wind | 9 | 270 | > th | dose independent | rect. | 12 | 11 |
| 63 | 669.01 | wind | 7 | 270 | > th | dose dependent | sin | 18 | NA |
| 74 | 670.11 | wind | 9 | 720 | > th | dose independent | rect. | 12 | 2 |
| 84 | 670.76 | wind | 9 | 270 | < th | dose independent | sin | 17 | NA |
| 128 | 672.40 | wind | 9 | 270 | > th | dose independent | sin | 18 | NA |
| 141 | 672.55 | wind | 7 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 159 | 673.11 | wind | 7 | 270 | > th | dose dependent | no | NA | NA |
| 167 | 673.19 | wind | 7 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 176 | 673.44 | wind | 7 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 215 | 674.16 | wind | 7 | 270 | > th | dose dependent | rect. | 21 | 23 |
| 244 | 674.73 | wind | 7 | 720 | < th | dose independent | rect. | 10 | 8 |
| 253 | 674.95 | wind | 9 | 270 | > th | dose independent | no | NA | NA |
| 269 | 674.95 | wind | 9 | 270 | > th | dose independent | rect. | 1 | 22 |
| 287 | 675.01 | wind | 7 | 720 | > th | dose dependent | rect. | 4 | 13 |
| 289 | 675.06 | wind | 7 | 720 | > th | dose dependent | rect. | 7 | 10 |
| 294 | 675.09 | wind | 7 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 297 | 675.19 | wind | 9 | 270 | > th | dose independent | rect. | 15 | 23 |
| 300 | 675.26 | wind | 7 | 720 | > th | dose dependent | rect. | 22 | 18 |
| 332 | 675.45 | wind | 9 | 270 | > th | dose independent | rect. | 19 | 23 |
| 342 | 675.71 | wind | 9 | 270 | > th | dose independent | rect. | 21 | 23 |
| 355 | 675.84 | wind | 9 | 270 | < th | dose independent | no | NA | NA |
| 372 | 676.05 | wind | 7 | 720 | > th | dose independent | rect. | 10 | 7 |
| 393 | 676.42 | wind | 9 | 720 | > th | dose independent | rect. | 22 | 18 |
| 481 | 677.00 | wind | 9 | 720 | > th | dose independent | rect. | 1 | 15 |
| 525 | 677.50 | wind | 9 | 720 | < th | dose independent | sin | 0 | NA |
| 602 | 678.82 | wind | 7 | 720 | > th | dose dependent | sin | 1 | NA |
| 604 | 678.86 | wind | 9 | 10 | > th | dose independent | rect. | 13 | 9 |
| 653 | 679.20 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 12 |
| 678 | 679.59 | wind | 7 | 720 | < th | dose independent | rect. | 2 | 16 |
| 729 | 680.08 | wind | 7 | 720 | > th | dose dependent | rect. | 15 | 1 |
| 785 | 681.07 | wind | 9 | 10 | < th | dose independent | sin | 14 | NA |
| 797 | 681.21 | wind | 9 | 720 | > th | dose independent | sin | 2 | NA |
| 819 | 681.54 | wind | 9 | 720 | < th | dose independent | sin | 5 | NA |
| 821 | 681.62 | wind | 7 | 720 | < th | dose independent | rect. | 6 | 16 |
| 902 | 682.35 | wind | 7 | 720 | < th | dose independent | rect. | 7 | 9 |
| 974 | 683.03 | wind | 9 | 10 | > th | dose independent | rect. | 13 | 7 |