Os02g0464400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Arabinoxylan arabinofuranohydrolase isoenzyme AXAH-II.
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Os02g0464400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Arabinoxylan arabinofuranohydrolase isoenzyme AXAH-II.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 58.28 | 0.359 | 7.59 | 0.526 | 0.628 | -0.47 | 0.0741 | 1.8 | 0.44 | 15.5 | 10.02 | 1272 | -- | -- |
| 63.07 | 0.37 | 7.63 | 0.272 | 0.641 | -0.388 | -0.0388 | -- | 0.403 | 15.5 | 12.81 | 1259 | -- | -- |
| 58.13 | 0.355 | 7.59 | 0.518 | 0.62 | -0.493 | -- | 1.8 | 0.437 | 15.7 | 10.02 | 1236 | -- | -- |
| 62.23 | 0.367 | 7.64 | 0.277 | 0.667 | -0.384 | -- | -- | 0.361 | 15.7 | 21 | 1186 | -- | -- |
| 79.93 | 0.416 | 7.6 | 0.512 | -- | -0.582 | -- | 1.67 | 0.446 | -- | 10 | 1259 | -- | -- |
| 66.71 | 0.383 | 7.66 | 0.164 | 0.662 | -- | -0.182 | -- | 0.234 | 14.9 | -- | -- | -- | -- |
| 66.82 | 0.383 | 7.66 | 0.159 | 0.662 | -- | -- | -- | 0.233 | 14.9 | -- | -- | -- | -- |
| 82.9 | 0.424 | 7.64 | 0.264 | -- | -0.475 | -- | -- | 0.338 | -- | 21.25 | 1268 | -- | -- |
| 63.47 | 0.371 | 7.63 | -- | 0.639 | -0.36 | -- | -- | 0.348 | 15.4 | 29.76 | 1191 | -- | -- |
| 92.03 | 0.448 | 7.66 | 0.131 | -- | -- | -- | -- | 0.216 | -- | -- | -- | -- | -- |
| 67.49 | 0.384 | 7.66 | -- | 0.659 | -- | -- | -- | 0.215 | 14.9 | -- | -- | -- | -- |
| 83.93 | 0.427 | 7.63 | -- | -- | -0.465 | -- | -- | 0.273 | -- | 29.84 | 1240 | -- | -- |
| 92.48 | 0.449 | 7.66 | -- | -- | -- | -- | -- | 0.201 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 58.17 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 10 | 12 |
| 3 | 58.24 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 10 | 2 |
| 5 | 58.33 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 8 |
| 8 | 58.50 | temperature | 30.0 | 720 | < th | dose independent | rect. | 14 | 3 |
| 14 | 58.68 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 23 | 58.82 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 14 | 3 |
| 39 | 59.03 | humidity | 90.0 | 720 | < th | dose independent | rect. | 10 | 12 |
| 41 | 59.04 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 9 | 8 |
| 42 | 59.04 | humidity | 90.0 | 720 | < th | dose dependent | sin | 19 | NA |
| 46 | 59.10 | humidity | 60.0 | 720 | > th | dose independent | rect. | 22 | 19 |
| 55 | 59.15 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 17 |
| 67 | 59.19 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 13 | 12 |
| 68 | 59.20 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 5 |
| 70 | 59.22 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 12 | 14 |
| 72 | 59.23 | humidity | 90.0 | 720 | < th | dose independent | rect. | 10 | 14 |
| 79 | 59.27 | temperature | 15.0 | 720 | > th | dose independent | rect. | 10 | 10 |
| 80 | 59.27 | temperature | 15.0 | 90 | > th | dose independent | rect. | 10 | 23 |
| 86 | 59.29 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 17 | 3 |
| 95 | 59.36 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 15 | 6 |
| 102 | 59.39 | temperature | 30.0 | 720 | < th | dose independent | rect. | 14 | 12 |
| 119 | 59.41 | humidity | 60.0 | 720 | > th | dose independent | rect. | 14 | 3 |
| 123 | 59.42 | humidity | 60.0 | 720 | > th | dose independent | rect. | 5 | 12 |
| 131 | 59.43 | temperature | 15.0 | 720 | > th | dose independent | rect. | 8 | 14 |
| 143 | 59.47 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 13 | 6 |
| 144 | 59.47 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 8 | 16 |
| 172 | 59.61 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 5 |
| 179 | 59.63 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 22 | 21 |
| 183 | 59.65 | temperature | 15.0 | 720 | > th | dose independent | rect. | 10 | 19 |
| 185 | 59.66 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 12 | 5 |
| 196 | 59.71 | radiation | 10.0 | 1440 | < th | dose dependent | sin | 20 | NA |
| 205 | 59.72 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 12 | 22 |
| 239 | 59.78 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 264 | 59.79 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 12 | 20 |
| 265 | 59.80 | humidity | 80.0 | 720 | < th | dose independent | rect. | 17 | 3 |
| 308 | 59.86 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 20 | 23 |
| 330 | 59.89 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 5 | 21 |
| 341 | 59.92 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 12 | 16 |
| 359 | 59.95 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 8 | 20 |
| 368 | 59.96 | radiation | 10.0 | 1440 | > th | dose independent | sin | 22 | NA |
| 372 | 59.96 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 386 | 60.00 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 10 | 4 |
| 420 | 60.04 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 429 | 60.06 | humidity | 60.0 | 720 | > th | dose independent | rect. | 14 | 1 |
| 435 | 60.06 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 5 | 12 |
| 449 | 60.10 | temperature | 15.0 | 720 | > th | dose independent | rect. | 10 | 12 |
| 460 | 60.11 | temperature | 15.0 | 720 | > th | dose independent | rect. | 17 | 12 |
| 463 | 60.12 | humidity | 90.0 | 720 | > th | dose independent | rect. | 9 | 15 |
| 495 | 60.16 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 17 | 3 |
| 499 | 60.17 | temperature | 30.0 | 720 | < th | dose independent | sin | 15 | NA |
| 511 | 60.18 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 7 |
| 516 | 60.19 | temperature | 15.0 | 720 | > th | dose independent | rect. | 17 | 5 |
| 517 | 60.19 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 518 | 60.19 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 9 | 7 |
| 530 | 60.21 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 17 | 10 |
| 558 | 60.22 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 9 | 23 |
| 559 | 60.22 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 18 | 23 |
| 570 | 60.24 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 16 | 10 |
| 601 | 60.27 | humidity | 50.0 | 720 | > th | dose dependent | sin | 18 | NA |
| 605 | 60.27 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 10 | 12 |
| 678 | 60.32 | humidity | 90.0 | 720 | < th | dose independent | rect. | 17 | 5 |
| 684 | 60.32 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 12 | 14 |
| 693 | 60.33 | humidity | 90.0 | 720 | > th | dose independent | rect. | 9 | 17 |
| 703 | 60.33 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 12 | 12 |
| 742 | 60.36 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 23 | 1 |
| 771 | 60.38 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 7 | 18 |
| 773 | 60.39 | humidity | 90.0 | 720 | < th | dose independent | sin | 20 | NA |
| 790 | 60.39 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 5 | 21 |
| 819 | 60.42 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 10 |
| 831 | 60.43 | humidity | 50.0 | 720 | > th | dose dependent | no | NA | NA |
| 841 | 60.44 | temperature | 15.0 | 720 | > th | dose independent | rect. | 17 | 21 |
| 846 | 60.44 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 10 | 18 |
| 858 | 60.46 | humidity | 70.0 | 720 | > th | dose independent | rect. | 14 | 11 |
| 907 | 60.50 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 938 | 60.53 | radiation | 10.0 | 1440 | > th | dose independent | no | NA | NA |
| 939 | 60.53 | humidity | 90.0 | 720 | > th | dose independent | rect. | 23 | 1 |