FiT-DB / Search/ Help/ Sample detail

Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0454300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.28 (0.0189) R2 : 0.00122
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0297 (0.0397) R2dN8 : 0.00158 R2N8 : 0.00122
σ : 0.356
deviance : 58.03
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
53.74 0.344 3.31 0.0357 0.222 0.197 -0.301 1.59 -0.00685 6.41 5.104 4196 -- --
54.63 0.344 3.27 0.0826 0.224 0.198 -0.246 -- 0.0269 6.62 3.599 12680 -- --
53.95 0.342 3.31 0.0313 0.221 0.195 -- 1.56 -0.00414 6.49 5.125 4109 -- --
54.64 0.344 3.27 0.145 0.221 0.218 -- -- 0.0542 6.62 4.496 16843 -- --
56.48 0.35 3.31 0.0458 -- 0.231 -- 1.58 -0.000175 -- 5.097 4195 -- --
55.2 0.348 3.27 0.0381 0.224 -- -0.273 -- 0.0287 6.56 -- -- -- --
55.39 0.349 3.27 0.0341 0.223 -- -- -- 0.0295 6.53 -- -- -- --
56.44 0.351 3.28 -0.00189 -- -0.137 -- -- 0.0285 -- 3.584 15667 -- --
55.09 0.346 3.27 -- 0.227 0.147 -- -- 0.0344 6.36 4.13 16796 -- --
57.99 0.356 3.28 0.0396 -- -- -- -- 0.0341 -- -- -- -- --
55.42 0.348 3.27 -- 0.224 -- -- -- 0.0257 6.52 -- -- -- --
56.44 0.351 3.28 -- -- -0.137 -- -- 0.0287 -- 3.584 15667 -- --
58.03 0.356 3.28 -- -- -- -- -- 0.0297 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 50.63 radiation 10.0 30 > th dose independent rect. 17 14
2 50.63 radiation 10.0 30 > th dose dependent rect. 17 14
3 50.64 radiation 10.0 10 > th dose independent rect. 6 1
30 50.64 radiation 10.0 10 > th dose dependent rect. 6 1
57 50.75 atmosphere 1005.0 10 > th dose dependent rect. 2 6
75 51.25 atmosphere 1005.0 10 > th dose dependent rect. 6 2
90 51.38 temperature 25.0 90 < th dose independent rect. 6 1
91 51.49 humidity 90.0 90 < th dose independent rect. 2 5
92 51.51 atmosphere 995.0 720 > th dose independent rect. 7 8
98 51.67 wind 9.0 720 < th dose independent rect. 19 8
99 51.68 wind 1.0 10 < th dose independent rect. 6 1
101 51.77 precipitation 0.1 720 < th dose independent rect. 19 8
103 51.77 precipitation 0.1 720 < th dose dependent rect. 19 8
104 51.80 atmosphere 995.0 720 > th dose independent rect. 3 16
107 51.87 temperature 10.0 720 > th dose independent rect. 19 8
108 51.87 temperature 30.0 720 < th dose independent rect. 19 8
109 51.87 humidity 50.0 720 > th dose independent rect. 19 8
110 51.87 atmosphere 995.0 720 > th dose independent rect. 19 8
111 51.87 radiation 1.0 720 < th dose independent rect. 19 8
116 51.87 temperature 10.0 720 > th dose independent rect. 3 16
118 51.87 radiation 1.0 720 < th dose dependent rect. 19 8
123 51.88 temperature 10.0 720 > th dose independent rect. 7 8
124 51.88 atmosphere 1015.0 720 < th dose independent rect. 7 8
125 51.88 temperature 10.0 720 > th dose independent rect. 15 16
127 51.92 wind 3.0 10 < th dose dependent rect. 6 1
129 51.93 precipitation 0.1 720 < th dose independent rect. 7 8
130 51.93 precipitation 0.1 720 < th dose dependent rect. 7 8
132 51.97 atmosphere 995.0 720 > th dose independent rect. 15 16
133 51.99 humidity 90.0 90 < th dose dependent rect. 2 5
134 52.03 temperature 30.0 90 < th dose dependent rect. 6 1
136 52.09 precipitation 0.1 720 < th dose independent rect. 15 16
138 52.09 precipitation 0.1 720 < th dose dependent rect. 15 16
140 52.17 wind 9.0 720 < th dose independent rect. 15 16
141 52.23 atmosphere 995.0 720 > th dose independent rect. 17 16
145 52.30 atmosphere 1000.0 720 > th dose independent rect. 21 8
146 52.30 radiation 1.0 720 < th dose independent rect. 21 8
150 52.33 radiation 10.0 720 < th dose dependent rect. 21 8
151 52.34 atmosphere 995.0 720 > th dose independent rect. 9 8
152 52.34 atmosphere 995.0 720 > th dose independent rect. 5 16
153 52.35 humidity 50.0 720 > th dose independent rect. 7 8
158 52.38 temperature 10.0 720 > th dose independent rect. 21 8
159 52.38 temperature 30.0 720 < th dose independent rect. 21 8
160 52.38 humidity 50.0 720 > th dose independent rect. 21 8
167 52.38 temperature 10.0 720 > th dose independent rect. 5 16
169 52.39 temperature 10.0 720 > th dose independent rect. 9 8
170 52.39 atmosphere 1015.0 720 < th dose independent rect. 9 8
171 52.39 temperature 10.0 720 > th dose independent rect. 17 16
172 52.39 radiation 10.0 10 < th dose dependent rect. 6 1
174 52.41 humidity 80.0 30 > th dose dependent rect. 6 1
178 52.52 atmosphere 1000.0 90 > th dose independent rect. 7 23
190 52.61 precipitation 0.1 720 < th dose independent rect. 21 8
192 52.61 precipitation 0.1 720 < th dose dependent rect. 21 8
207 52.65 temperature 30.0 10 < th dose dependent rect. 6 2
224 52.69 temperature 25.0 720 > th dose dependent rect. 22 11
225 52.70 atmosphere 1010.0 10 < th dose independent sin 7 NA
227 52.72 wind 9.0 720 < th dose independent rect. 21 8
243 52.73 precipitation 0.1 720 < th dose independent rect. 3 16
245 52.73 precipitation 0.1 720 < th dose dependent rect. 3 16
248 52.74 atmosphere 1015.0 720 < th dose independent rect. 5 16
251 52.76 atmosphere 1000.0 720 > th dose independent rect. 7 2
255 52.78 radiation 10.0 30 > th dose independent sin 11 NA
257 52.80 temperature 25.0 720 > th dose dependent rect. 24 9
258 52.81 wind 3.0 90 < th dose independent rect. 6 1
259 52.81 wind 7.0 720 < th dose independent rect. 19 2
260 52.81 atmosphere 1005.0 270 > th dose dependent rect. 2 2
263 52.83 wind 1.0 90 > th dose independent rect. 6 1
264 52.83 wind 9.0 720 < th dose independent rect. 19 16
267 52.83 radiation 1.0 43200 < th dose dependent rect. 3 1
269 52.86 humidity 50.0 720 > th dose independent rect. 19 16
272 52.87 atmosphere 1015.0 720 < th dose independent rect. 3 16
273 52.87 precipitation 0.1 720 < th dose independent rect. 5 16
274 52.87 atmosphere 1000.0 10 > th dose independent rect. 8 22
275 52.87 atmosphere 1010.0 10 < th dose independent rect. 21 23
279 52.87 precipitation 0.1 720 < th dose dependent rect. 5 16
280 52.88 wind 9.0 4320 < th dose independent rect. 7 2
285 52.88 atmosphere 1005.0 10 > th dose dependent rect. 2 2
289 52.91 humidity 50.0 720 > th dose independent rect. 17 16
292 52.92 atmosphere 1000.0 10 > th dose independent rect. 21 23
295 52.93 atmosphere 995.0 30 > th dose dependent rect. 19 13
298 52.94 precipitation 0.1 90 < th dose independent rect. 6 1
300 52.94 precipitation 0.1 720 < th dose independent rect. 9 8
301 52.94 precipitation 0.1 90 < th dose dependent rect. 6 1
303 52.94 precipitation 0.1 720 < th dose dependent rect. 9 8
306 52.95 temperature 10.0 90 > th dose independent rect. 6 1
309 52.95 humidity 50.0 90 > th dose independent rect. 6 1
311 52.95 atmosphere 995.0 90 > th dose independent rect. 6 1
312 52.95 atmosphere 1015.0 90 < th dose independent rect. 6 1
313 52.95 radiation 40.0 90 < th dose independent rect. 6 1
315 52.95 temperature 10.0 90 > th dose independent rect. 7 23
319 52.96 humidity 80.0 14400 < th dose dependent rect. 7 1
322 52.97 humidity 80.0 14400 < th dose dependent rect. 1 8
323 52.98 atmosphere 995.0 720 > th dose independent rect. 21 22
324 52.98 atmosphere 1010.0 10 < th dose independent rect. 3 23
328 53.00 wind 1.0 720 > th dose independent rect. 7 2
329 53.00 humidity 90.0 90 < th dose dependent rect. 6 1
331 53.00 radiation 10.0 30 < th dose dependent rect. 21 23
332 53.01 temperature 10.0 720 > th dose independent rect. 11 8
333 53.01 atmosphere 1015.0 720 < th dose independent rect. 11 8
334 53.01 temperature 10.0 720 > th dose independent rect. 19 16
335 53.01 atmosphere 995.0 720 > th dose independent rect. 19 16
341 53.02 humidity 90.0 90 < th dose independent rect. 6 1
348 53.04 atmosphere 995.0 30 > th dose independent rect. 8 11
353 53.06 temperature 25.0 720 > th dose independent rect. 3 6
354 53.06 humidity 50.0 90 > th dose independent rect. 7 23
360 53.08 wind 9.0 720 < th dose independent rect. 23 8
364 53.09 humidity 90.0 90 < th dose independent rect. 2 2
365 53.09 humidity 90.0 10 < th dose independent rect. 6 2
367 53.09 precipitation 0.1 90 < th dose independent rect. 7 23
370 53.09 precipitation 0.1 90 < th dose dependent rect. 7 23
372 53.10 temperature 10.0 720 > th dose independent rect. 23 8
373 53.10 temperature 30.0 720 < th dose independent rect. 23 8
374 53.10 humidity 50.0 720 > th dose independent rect. 23 8
376 53.10 atmosphere 995.0 720 > th dose independent rect. 23 8
377 53.10 radiation 40.0 720 < th dose independent rect. 23 8
378 53.10 temperature 10.0 720 > th dose independent rect. 7 16
382 53.10 wind 9.0 10 < th dose dependent rect. 19 13
383 53.11 atmosphere 1010.0 10 < th dose independent rect. 3 10
384 53.11 wind 5.0 30 < th dose independent rect. 19 13
385 53.11 atmosphere 1010.0 10 < th dose independent rect. 21 14
386 53.11 temperature 30.0 10 < th dose dependent rect. 20 1
390 53.12 temperature 30.0 720 < th dose independent rect. 15 16
394 53.13 atmosphere 1005.0 10 > th dose independent rect. 20 1
396 53.13 atmosphere 1015.0 720 < th dose independent rect. 19 2
397 53.13 humidity 50.0 10 > th dose independent rect. 8 22
402 53.14 temperature 10.0 1440 > th dose independent rect. 9 11
405 53.14 temperature 10.0 1440 > th dose independent rect. 20 13
408 53.14 humidity 50.0 1440 > th dose independent rect. 20 13
410 53.14 atmosphere 995.0 1440 > th dose independent rect. 20 13
411 53.14 temperature 15.0 10 > th dose independent rect. 8 22
415 53.14 humidity 90.0 10 < th dose dependent rect. 20 1
419 53.15 atmosphere 995.0 720 > th dose independent rect. 11 8
425 53.16 wind 5.0 10 < th dose dependent rect. 20 1
426 53.16 temperature 25.0 720 > th dose dependent rect. 7 1
434 53.18 humidity 70.0 720 > th dose independent rect. 7 2
435 53.18 precipitation 0.1 10 < th dose independent rect. 6 2
436 53.18 precipitation 0.1 720 < th dose independent rect. 19 2
437 53.18 wind 1.0 90 > th dose independent rect. 8 11
439 53.18 radiation 10.0 30 > th dose independent rect. 11 21
443 53.18 precipitation 0.1 10 < th dose dependent rect. 6 2
444 53.18 precipitation 0.1 720 < th dose dependent rect. 19 2
447 53.19 temperature 25.0 720 > th dose independent rect. 7 2
448 53.19 humidity 50.0 30 > th dose independent rect. 8 11
449 53.19 atmosphere 995.0 720 > th dose independent rect. 7 16
454 53.20 temperature 10.0 10 > th dose independent rect. 6 2
456 53.20 temperature 30.0 10 < th dose independent rect. 6 2
457 53.20 humidity 50.0 10 > th dose independent rect. 6 2
459 53.20 atmosphere 995.0 10 > th dose independent rect. 6 2
460 53.20 atmosphere 1015.0 10 < th dose independent rect. 6 2
469 53.20 radiation 10.0 30 < th dose dependent rect. 3 23
471 53.21 temperature 10.0 720 > th dose independent rect. 19 2
472 53.21 temperature 30.0 720 < th dose independent rect. 19 2
474 53.21 humidity 50.0 720 > th dose independent rect. 19 2
475 53.21 atmosphere 995.0 720 > th dose independent rect. 19 2
476 53.21 radiation 1.0 720 < th dose independent rect. 19 2
483 53.21 temperature 10.0 720 > th dose independent rect. 21 22
485 53.21 humidity 90.0 30 < th dose dependent rect. 3 1
486 53.21 radiation 1.0 1440 < th dose dependent rect. 21 1
487 53.21 radiation 1.0 720 < th dose dependent rect. 19 2
511 53.22 wind 9.0 90 < th dose independent rect. 7 23
523 53.24 wind 5.0 10 < th dose independent rect. 20 1
526 53.24 temperature 10.0 1440 > th dose independent rect. 7 2
534 53.24 atmosphere 1015.0 1440 < th dose independent rect. 7 2
536 53.24 precipitation 0.1 30 < th dose independent rect. 19 13
537 53.24 temperature 10.0 1440 > th dose independent rect. 9 22
543 53.24 precipitation 0.1 30 < th dose dependent rect. 19 13
546 53.25 atmosphere 995.0 10 > th dose dependent rect. 20 1
547 53.25 radiation 40.0 90 < th dose dependent rect. 6 1
555 53.26 atmosphere 1005.0 10 > th dose independent rect. 6 2
562 53.26 precipitation 0.1 10 < th dose independent rect. 8 22
563 53.26 precipitation 0.1 720 < th dose independent rect. 9 22
567 53.26 precipitation 0.1 10 < th dose dependent rect. 8 22
568 53.26 precipitation 0.1 720 < th dose dependent rect. 9 22
569 53.27 wind 1.0 10 > th dose independent rect. 20 1
570 53.27 wind 9.0 10 < th dose independent rect. 20 1
573 53.27 temperature 10.0 10 > th dose independent rect. 20 1
575 53.27 temperature 30.0 10 < th dose independent rect. 20 1
576 53.27 humidity 50.0 10 > th dose independent rect. 20 1
580 53.27 atmosphere 1010.0 10 < th dose independent rect. 20 1
582 53.27 radiation 1.0 10 < th dose independent rect. 20 1
587 53.27 precipitation 0.1 10 < th dose independent rect. 20 1
588 53.27 humidity 70.0 720 > th dose independent rect. 19 2
590 53.27 precipitation 0.1 720 < th dose independent rect. 7 2
593 53.27 radiation 40.0 720 < th dose independent rect. 15 16
594 53.27 temperature 10.0 10 > th dose independent rect. 21 23
597 53.27 radiation 1.0 10 < th dose dependent rect. 20 1
602 53.27 precipitation 0.1 10 < th dose dependent rect. 20 1
603 53.27 precipitation 0.1 720 < th dose dependent rect. 7 2
607 53.28 humidity 80.0 14400 < th dose independent rect. 7 1
608 53.28 humidity 90.0 10 < th dose independent rect. 20 1
612 53.28 humidity 90.0 10 < th dose dependent rect. 6 2
619 53.29 temperature 30.0 1440 < th dose independent rect. 7 1
634 53.29 humidity 50.0 30 > th dose independent rect. 21 23
641 53.30 wind 1.0 720 > th dose independent rect. 19 2
642 53.30 wind 1.0 720 > th dose independent rect. 9 8
645 53.30 precipitation 0.1 720 < th dose independent rect. 17 16
647 53.30 atmosphere 1015.0 10 < th dose dependent rect. 20 1
650 53.30 humidity 90.0 10 < th dose dependent rect. 3 5
652 53.30 precipitation 0.1 720 < th dose dependent rect. 17 16
657 53.31 wind 5.0 4320 > th dose independent rect. 18 7
659 53.31 temperature 10.0 30 > th dose independent rect. 8 11
661 53.31 atmosphere 1015.0 30 < th dose independent rect. 8 11
662 53.31 temperature 10.0 30 > th dose independent rect. 19 13
663 53.31 temperature 30.0 30 < th dose independent rect. 19 13
664 53.31 humidity 50.0 30 > th dose independent rect. 19 13
666 53.31 atmosphere 995.0 30 > th dose independent rect. 19 13
667 53.31 wind 1.0 10 > th dose independent rect. 8 22
675 53.32 wind 5.0 4320 < th dose independent rect. 18 7
676 53.32 precipitation 0.1 720 < th dose independent rect. 11 8
677 53.32 precipitation 0.1 30 < th dose independent rect. 8 11
684 53.32 precipitation 0.1 720 < th dose dependent rect. 11 8
685 53.32 precipitation 0.1 30 < th dose dependent rect. 8 11
711 53.33 humidity 50.0 10 > th dose dependent rect. 20 1
737 53.34 radiation 40.0 720 < th dose independent rect. 17 16
751 53.34 humidity 80.0 90 < th dose dependent rect. 24 3
761 53.35 atmosphere 1000.0 30 > th dose independent rect. 11 21
762 53.35 radiation 1.0 90 < th dose independent rect. 21 22
763 53.35 temperature 10.0 90 > th dose dependent rect. 6 1
781 53.36 temperature 15.0 30 > th dose independent rect. 21 9
783 53.36 temperature 10.0 10 > th dose dependent rect. 20 1
799 53.37 atmosphere 1015.0 30 < th dose independent rect. 19 13
801 53.37 wind 9.0 720 < th dose independent rect. 9 22
809 53.38 wind 9.0 720 < th dose independent rect. 9 8
810 53.38 atmosphere 1000.0 30 > th dose independent rect. 21 9
811 53.38 wind 9.0 30 < th dose independent rect. 8 11
813 53.38 atmosphere 1000.0 30 > th dose independent rect. 3 23
827 53.39 precipitation 0.1 30 < th dose independent rect. 6 15
831 53.39 temperature 10.0 720 > th dose dependent rect. 7 2
834 53.39 temperature 10.0 30 > th dose dependent rect. 21 9
835 53.39 precipitation 0.1 30 < th dose dependent rect. 6 15
841 53.40 atmosphere 1010.0 10 < th dose independent rect. 21 10
852 53.40 wind 1.0 30 > th dose dependent rect. 20 1
888 53.42 precipitation 0.1 720 < th dose independent rect. 21 22
891 53.42 precipitation 0.1 720 < th dose dependent rect. 21 22
892 53.43 temperature 10.0 1440 > th dose independent rect. 21 1
895 53.43 temperature 30.0 1440 < th dose independent rect. 21 1
899 53.43 humidity 50.0 1440 > th dose independent rect. 21 1
905 53.43 atmosphere 995.0 1440 > th dose independent rect. 21 1
906 53.43 radiation 1.0 1440 < th dose independent rect. 21 1
957 53.43 wind 3.0 43200 < th dose dependent rect. 9 1
958 53.43 wind 3.0 43200 < th dose dependent rect. 19 1
983 53.44 wind 7.0 720 < th dose independent rect. 17 12
986 53.44 atmosphere 1010.0 10 < th dose independent rect. 4 15
987 53.44 wind 9.0 720 < th dose independent rect. 5 16
989 53.44 precipitation 0.1 720 < th dose independent rect. 19 17
994 53.44 temperature 25.0 30 > th dose dependent rect. 20 2
996 53.44 precipitation 0.1 720 < th dose dependent rect. 19 17