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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0445600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Auxin-induced SAUR-like protein (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.4 (0.0234) R2 : 0.00776
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0931 (0.0493) R2dN8 : 0.01 R2N8 : 0.00776
σ : 0.441
deviance : 89.28
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
79.86 0.42 3.4 0.074 0.303 0.641 -0.559 1.17 -0.0505 6.41 22.4 962 -- --
81.16 0.42 3.38 0.199 0.3 0.395 -0.514 -- -0.0139 6.25 24.3 909 -- --
80.56 0.418 3.4 0.0687 0.305 0.636 -- 1.14 -0.0499 6.52 22.27 1031 -- --
81.75 0.421 3.38 0.188 0.297 0.377 -- -- -0.0163 6.67 24.2 887 -- --
85.21 0.43 3.41 0.0864 -- 0.678 -- 1.15 -0.0371 -- 22.39 857 -- --
83.35 0.428 3.4 0.0877 0.318 -- -0.428 -- -0.0906 6.85 -- -- -- --
83.77 0.429 3.39 0.0814 0.317 -- -- -- -0.0889 7.19 -- -- -- --
85.22 0.43 3.38 0.208 -- 0.476 -- -- 0.0123 -- 29.34 589 -- --
82.57 0.423 3.39 -- 0.302 0.292 -- -- -0.0504 6.8 24.2 868 -- --
89.08 0.441 3.4 0.0872 -- -- -- -- -0.0834 -- -- -- -- --
83.94 0.429 3.4 -- 0.318 -- -- -- -0.098 7.18 -- -- -- --
86.28 0.433 3.39 -- -- 0.4 -- -- -0.0244 -- 29.5 533 -- --
89.28 0.441 3.4 -- -- -- -- -- -0.0931 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 72.25 humidity 80.0 10 < th dose independent rect. 6 2
5 72.39 humidity 80.0 10 < th dose independent rect. 23 9
11 72.79 radiation 10.0 30 > th dose independent rect. 7 1
12 74.00 temperature 25.0 30 > th dose independent rect. 7 1
36 75.12 radiation 10.0 10 > th dose independent rect. 16 16
42 76.57 atmosphere 1005.0 90 > th dose dependent rect. 2 1
56 76.70 atmosphere 1000.0 30 > th dose independent rect. 3 23
60 76.98 atmosphere 1005.0 10 > th dose dependent rect. 2 2
63 77.15 temperature 25.0 90 > th dose independent rect. 1 1
65 77.25 temperature 25.0 90 > th dose dependent rect. 1 2
66 77.27 temperature 15.0 30 > th dose independent rect. 3 23
67 77.28 radiation 1.0 43200 < th dose dependent rect. 3 1
70 77.39 radiation 1.0 4320 < th dose dependent rect. 3 1
87 77.50 wind 9.0 1440 < th dose independent rect. 3 1
88 77.50 temperature 10.0 1440 > th dose independent rect. 3 1
91 77.50 temperature 30.0 1440 < th dose independent rect. 3 1
95 77.50 humidity 50.0 1440 > th dose independent rect. 3 1
104 77.50 atmosphere 995.0 1440 > th dose independent rect. 3 1
105 77.50 radiation 1.0 1440 < th dose independent rect. 3 1
125 77.50 temperature 10.0 1440 > th dose independent rect. 4 23
135 77.56 wind 3.0 30 < th dose independent rect. 2 1
136 77.57 wind 3.0 30 < th dose dependent rect. 2 1
142 77.58 atmosphere 1005.0 30 > th dose independent rect. 2 1
148 77.60 humidity 90.0 30 > th dose independent rect. 2 1
150 77.61 temperature 10.0 30 > th dose independent rect. 2 1
152 77.61 temperature 30.0 30 < th dose independent rect. 2 1
153 77.61 humidity 50.0 30 > th dose independent rect. 2 1
156 77.61 atmosphere 995.0 30 > th dose independent rect. 2 1
157 77.61 atmosphere 1010.0 30 < th dose independent rect. 2 1
159 77.61 radiation 1.0 30 < th dose independent rect. 2 1
164 77.61 precipitation 0.1 30 < th dose independent rect. 2 1
166 77.61 humidity 50.0 30 > th dose dependent rect. 2 1
169 77.61 radiation 1.0 30 < th dose dependent rect. 2 1
174 77.61 precipitation 0.1 30 < th dose dependent rect. 2 1
181 77.65 atmosphere 1015.0 30 < th dose dependent rect. 2 1
184 77.71 temperature 30.0 30 < th dose dependent rect. 2 1
185 77.73 wind 1.0 30 > th dose independent rect. 2 1
194 77.82 precipitation 0.1 30 < th dose independent rect. 3 23
197 77.82 precipitation 0.1 30 < th dose dependent rect. 3 23
237 78.03 wind 9.0 30 < th dose independent rect. 3 23
239 78.04 humidity 90.0 30 < th dose dependent rect. 3 5
244 78.22 atmosphere 1005.0 30 > th dose independent rect. 7 1
251 78.29 temperature 25.0 10 > th dose dependent rect. 7 1
258 78.41 radiation 10.0 30 < th dose dependent rect. 3 23
260 78.43 humidity 90.0 10 < th dose dependent rect. 7 1
268 78.54 atmosphere 995.0 720 > th dose independent rect. 23 16
275 78.59 humidity 50.0 30 > th dose independent rect. 3 23
299 79.02 precipitation 0.1 720 < th dose independent rect. 15 8
300 79.02 precipitation 0.1 720 < th dose dependent rect. 15 8
308 79.14 wind 5.0 10 < th dose dependent rect. 7 1
309 79.19 atmosphere 1005.0 30 > th dose independent rect. 2 6
310 79.19 radiation 10.0 30 < th dose independent rect. 3 23
314 79.24 wind 3.0 30 < th dose independent rect. 7 1
315 79.25 wind 9.0 720 < th dose independent rect. 15 8
316 79.26 humidity 90.0 90 < th dose independent rect. 2 1
323 79.29 temperature 10.0 720 > th dose independent rect. 15 8
324 79.29 temperature 10.0 720 > th dose independent rect. 23 16
325 79.29 temperature 20.0 720 > th dose independent rect. 3 17
330 79.37 wind 9.0 720 < th dose independent rect. 15 16
333 79.40 radiation 20.0 270 > th dose independent rect. 9 1
335 79.40 temperature 15.0 30 > th dose independent rect. 8 23
339 79.42 atmosphere 995.0 720 > th dose independent rect. 7 8
344 79.46 temperature 10.0 720 > th dose independent rect. 3 8
345 79.46 atmosphere 995.0 720 > th dose independent rect. 3 8
346 79.46 humidity 80.0 10 < th dose independent rect. 20 12
347 79.46 temperature 10.0 720 > th dose independent rect. 11 16
349 79.47 wind 1.0 14400 < th dose independent rect. 4 4
350 79.47 atmosphere 1000.0 30 > th dose independent rect. 8 23
352 79.47 atmosphere 1000.0 30 > th dose dependent rect. 2 6
357 79.51 wind 1.0 14400 < th dose independent rect. 4 7
358 79.51 wind 1.0 14400 < th dose independent rect. 2 9
359 79.51 wind 1.0 14400 < th dose independent rect. 2 12
360 79.51 temperature 20.0 720 < th dose independent rect. 4 12
362 79.51 wind 1.0 14400 < th dose dependent rect. 4 4
363 79.52 temperature 20.0 720 < th dose independent rect. 4 10
365 79.52 temperature 20.0 720 < th dose independent rect. 4 15
367 79.52 temperature 15.0 720 > th dose dependent rect. 3 1
376 79.54 wind 1.0 14400 < th dose independent rect. 4 11
379 79.54 wind 1.0 14400 < th dose dependent rect. 4 11
380 79.55 wind 1.0 43200 > th dose independent rect. 4 4
381 79.55 temperature 20.0 720 < th dose independent rect. 4 5
382 79.55 wind 1.0 14400 < th dose independent rect. 2 6
386 79.55 wind 1.0 14400 > th dose independent rect. 2 9
390 79.55 wind 1.0 14400 < th dose dependent rect. 2 6
391 79.55 wind 1.0 14400 < th dose dependent rect. 4 7
392 79.55 wind 1.0 14400 < th dose dependent rect. 4 13
393 79.55 wind 1.0 14400 < th dose dependent rect. 4 17
396 79.56 wind 1.0 14400 > th dose independent rect. 4 7
404 79.56 temperature 10.0 30 > th dose dependent rect. 3 23
405 79.57 wind 9.0 720 < th dose independent rect. 3 8
406 79.57 wind 9.0 720 < th dose independent rect. 19 8
416 79.58 wind 1.0 14400 > th dose independent rect. 2 12
444 79.62 wind 1.0 14400 > th dose independent rect. 2 6
454 79.63 wind 1.0 14400 > th dose independent rect. 4 11
463 79.64 radiation 10.0 10 > th dose independent sin 11 NA
472 79.64 wind 1.0 14400 < th dose dependent rect. 2 19
482 79.66 temperature 20.0 720 < th dose independent sin 1 NA
490 79.67 wind 1.0 14400 < th dose independent rect. 4 17
492 79.67 wind 1.0 14400 < th dose independent rect. 2 20
498 79.68 humidity 50.0 720 > th dose independent rect. 3 8
522 79.70 wind 1.0 10 > th dose independent rect. 8 23
523 79.70 wind 1.0 4320 < th dose dependent rect. 6 2
529 79.71 temperature 20.0 720 > th dose independent rect. 3 1
530 79.71 temperature 20.0 720 < th dose independent rect. 4 2
542 79.71 temperature 10.0 30 > th dose dependent rect. 8 23
556 79.72 wind 5.0 30 < th dose dependent rect. 2 6
592 79.76 radiation 30.0 90 > th dose independent sin 8 NA
595 79.77 temperature 20.0 720 > th dose independent sin 0 NA
601 79.77 wind 1.0 14400 > th dose independent rect. 2 20
603 79.78 wind 1.0 14400 < th dose independent sin 3 NA
623 79.78 temperature 15.0 30 > th dose independent rect. 8 18
637 79.79 precipitation 0.1 720 < th dose independent rect. 11 16
640 79.79 wind 1.0 14400 < th dose dependent sin 2 NA
641 79.79 wind 1.0 14400 < th dose dependent rect. 6 5
642 79.79 precipitation 0.1 720 < th dose dependent rect. 11 16
649 79.80 wind 1.0 14400 > th dose independent rect. 4 18
654 79.81 wind 1.0 30 > th dose independent rect. 7 1
657 79.81 temperature 15.0 720 > th dose independent rect. 7 8
664 79.81 radiation 1.0 10 > th dose dependent rect. 7 1
667 79.81 wind 1.0 14400 < th dose dependent rect. 6 9
674 79.83 wind 1.0 14400 > th dose independent sin 3 NA
680 79.84 wind 1.0 14400 < th dose independent rect. 6 2
681 79.84 wind 1.0 14400 < th dose independent rect. 6 5
741 79.89 humidity 90.0 720 < th dose independent rect. 24 5
783 79.91 wind 1.0 14400 > th dose independent rect. 6 4
785 79.91 humidity 90.0 720 < th dose independent rect. 24 7
793 79.91 wind 1.0 1440 < th dose dependent rect. 2 1
800 79.92 atmosphere 1015.0 720 < th dose independent rect. 3 8
814 79.94 wind 7.0 14400 < th dose independent rect. 5 5
818 79.94 temperature 25.0 720 < th dose dependent rect. 4 1
826 79.95 wind 7.0 14400 < th dose independent rect. 9 1
840 79.96 atmosphere 1015.0 720 < th dose independent rect. 7 8
841 79.96 temperature 10.0 720 > th dose independent rect. 15 16
842 79.96 atmosphere 1015.0 720 < th dose independent rect. 3 16
844 79.96 radiation 20.0 270 > th dose independent rect. 14 21
855 79.97 temperature 10.0 720 > th dose independent rect. 19 8
856 79.97 temperature 30.0 720 < th dose independent rect. 19 8
857 79.97 humidity 50.0 720 > th dose independent rect. 19 8
858 79.97 atmosphere 995.0 720 > th dose independent rect. 19 8
859 79.97 radiation 1.0 720 < th dose independent rect. 19 8
865 79.97 temperature 10.0 720 > th dose independent rect. 3 16
871 79.97 wind 7.0 14400 > th dose dependent rect. 6 4
872 79.97 temperature 20.0 30 > th dose dependent rect. 2 6
875 79.97 radiation 1.0 720 < th dose dependent rect. 19 8
890 79.98 temperature 25.0 720 < th dose dependent rect. 22 9
919 80.01 temperature 25.0 720 < th dose dependent rect. 22 19
925 80.02 wind 3.0 30 < th dose independent rect. 2 6
929 80.02 precipitation 0.1 720 < th dose independent rect. 19 8
944 80.02 precipitation 0.1 720 < th dose dependent rect. 19 8
954 80.03 humidity 90.0 90 < th dose independent rect. 1 20
969 80.04 wind 5.0 14400 < th dose dependent rect. 10 1
976 80.05 radiation 20.0 10 < th dose independent rect. 7 1
982 80.05 atmosphere 995.0 90 > th dose independent rect. 8 11
986 80.05 atmosphere 995.0 10 > th dose dependent rect. 7 1