Os02g0438200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin, T/K family protein.
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Os02g0438200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin, T/K family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15.83 | 0.187 | 10.1 | -0.173 | 0.422 | 0.475 | 0.152 | -0.026 | 0.1 | 2.6 | 21.2 | 1628 | -- | -- |
| 15.8 | 0.185 | 10.1 | -0.173 | 0.425 | 0.477 | 0.149 | -- | 0.101 | 2.64 | 21.2 | 1721 | -- | -- |
| 15.88 | 0.186 | 10.1 | -0.185 | 0.425 | 0.471 | -- | -0.0434 | 0.0978 | 2.7 | 21.22 | 1721 | -- | -- |
| 15.86 | 0.185 | 10.1 | -0.177 | 0.425 | 0.465 | -- | -- | 0.0956 | 2.79 | 21.4 | 1871 | -- | -- |
| 25.01 | 0.233 | 10.1 | -0.143 | -- | 0.484 | -- | -0.0235 | 0.108 | -- | 21.4 | 1101 | -- | -- |
| 21.96 | 0.22 | 10 | 0.0382 | 0.424 | -- | 0.112 | -- | 0.232 | 2.6 | -- | -- | -- | -- |
| 22 | 0.22 | 10 | 0.0353 | 0.425 | -- | -- | -- | 0.231 | 2.65 | -- | -- | -- | -- |
| 25.01 | 0.233 | 10.1 | -0.14 | -- | 0.484 | -- | -- | 0.108 | -- | 21.4 | 1101 | -- | -- |
| 16.53 | 0.189 | 10.1 | -- | 0.425 | 0.408 | -- | -- | 0.134 | 2.67 | 21.38 | 1672 | -- | -- |
| 32.52 | 0.266 | 10 | 0.0534 | -- | -- | -- | -- | 0.242 | -- | -- | -- | -- | -- |
| 22.03 | 0.22 | 10 | -- | 0.425 | -- | -- | -- | 0.227 | 2.65 | -- | -- | -- | -- |
| 25.43 | 0.235 | 10.1 | -- | -- | 0.416 | -- | -- | 0.123 | -- | 21.85 | 1059 | -- | -- |
| 32.6 | 0.266 | 10 | -- | -- | -- | -- | -- | 0.236 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 13.79 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 3 | 14.12 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 6 | 14.30 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 12 | 14.51 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 15 | 14.55 | wind | 9.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 20 | 14.72 | wind | 9.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 22 | 14.79 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 7 |
| 23 | 14.80 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 33 | 14.91 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 36 | 14.92 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 46 | 15.02 | wind | 1.0 | 43200 | > th | dose independent | rect. | 22 | 8 |
| 50 | 15.04 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 2 |
| 54 | 15.06 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 77 | 15.19 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 102 | 15.32 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 9 |
| 103 | 15.32 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 9 |
| 105 | 15.33 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 113 | 15.36 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 115 | 15.36 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 117 | 15.37 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 9 |
| 121 | 15.38 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 122 | 15.38 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 123 | 15.39 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 133 | 15.41 | wind | 1.0 | 43200 | < th | dose independent | rect. | 22 | 8 |
| 139 | 15.42 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 141 | 15.42 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 154 | 15.47 | wind | 1.0 | 43200 | < th | dose independent | rect. | 20 | 10 |
| 168 | 15.51 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 22 | 10 |
| 171 | 15.53 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 172 | 15.53 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 178 | 15.54 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 7 |
| 185 | 15.54 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 7 |
| 207 | 15.59 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 224 | 15.63 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 232 | 15.65 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 233 | 15.65 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 242 | 15.66 | temperature | 20.0 | 720 | > th | dose independent | rect. | 12 | 14 |
| 252 | 15.68 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 256 | 15.69 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 285 | 15.73 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 10 |
| 286 | 15.74 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 302 | 15.77 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 303 | 15.77 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 6 | 5 |
| 305 | 15.77 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 7 |
| 344 | 15.82 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 3 |
| 369 | 15.85 | wind | 3.0 | 43200 | < th | dose independent | rect. | 4 | 9 |
| 371 | 15.85 | wind | 3.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 381 | 15.86 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 395 | 15.87 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 411 | 15.89 | temperature | 20.0 | 720 | > th | dose independent | sin | 16 | NA |
| 414 | 15.89 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 12 |
| 435 | 15.92 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 455 | 15.94 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 7 |
| 466 | 15.94 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 12 |
| 479 | 15.95 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 10 |
| 508 | 15.98 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 12 |
| 510 | 15.98 | temperature | 20.0 | 720 | > th | dose independent | rect. | 6 | 18 |
| 536 | 16.00 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 550 | 16.01 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 575 | 16.03 | temperature | 20.0 | 270 | > th | dose independent | rect. | 20 | 12 |
| 589 | 16.04 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 611 | 16.05 | temperature | 20.0 | 270 | > th | dose independent | rect. | 11 | 22 |
| 667 | 16.09 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 7 |
| 711 | 16.11 | temperature | 20.0 | 270 | > th | dose independent | sin | 12 | NA |
| 729 | 16.12 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 813 | 16.15 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 4 | 9 |
| 846 | 16.17 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 861 | 16.17 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 12 | 19 |
| 908 | 16.19 | wind | 3.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 939 | 16.19 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 10 | 17 |
| 948 | 16.20 | temperature | 25.0 | 720 | < th | dose dependent | sin | 16 | NA |
| 966 | 16.20 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 13 | 14 |
| 967 | 16.20 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 22 | 15 |
| 977 | 16.21 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 12 | 19 |