BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0438200 Os02g0438200|AK107537
(630 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G19600.1 | chr4:10673619-10676532 FORWARD LENGTH=542 310 2e-84
AT5G45190.2 | chr5:18277808-18280733 REVERSE LENGTH=591 295 5e-80
AT1G27630.1 | chr1:9611647-9613967 FORWARD LENGTH=318 242 4e-64
AT4G19560.1 | chr4:10661904-10664369 FORWARD LENGTH=461 236 2e-62
AT1G35440.1 | chr1:13035294-13036037 REVERSE LENGTH=248 199 5e-51
AT2G26430.1 | chr2:11243433-11245504 REVERSE LENGTH=417 137 2e-32
AT5G48640.1 | chr5:19723653-19725641 REVERSE LENGTH=254 67 3e-11
AT5G48630.2 | chr5:19721663-19723119 REVERSE LENGTH=257 67 4e-11
AT1G20610.1 | chr1:7135073-7137273 REVERSE LENGTH=430 53 4e-07
>AT4G19600.1 | chr4:10673619-10676532 FORWARD LENGTH=542
Length = 541
Score = 310 bits (793), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 136/247 (55%), Positives = 192/247 (77%)
Query: 5 SQTSKLSCEHMYSWYFTREELEKFSPSRKDGITEIMESEIRQLYCSFIRDVGIRLKLPQM 64
S+ S + + WYF R+E+E+ SPSR D I E+ +R+ YC+F++D+G+RLK+PQ+
Sbjct: 20 SRNSNEKQDEVARWYFGRKEIEENSPSRLDSIDLKKETYLRKSYCTFLQDLGMRLKVPQV 79
Query: 65 TIATAIMFCHRFYLYQSLAKNGWQTIATVCIFLASKVEDTPCPLDQVIRVAYGTMYRRDP 124
TIATAI+FCHRF++ QS A+N +TIATVC+FLA KVE+TP PL VI V+Y ++++DP
Sbjct: 80 TIATAIIFCHRFFIRQSHARNDRRTIATVCMFLAGKVEETPRPLKDVIVVSYEIIHKKDP 139
Query: 125 ATARRIHQKDVFEKQKALILTGERLVLTTVRFDFNIQHPYRPLLDAMEKLGISQKEVKQV 184
TA++I QK+V+E+QK LIL GE++VL+T+ FDFN+ HPY+PL++A++K ++Q + QV
Sbjct: 140 TTAQKIKQKEVYEQQKELILNGEKIVLSTLGFDFNVYHPYKPLVEAIKKFKVAQNALAQV 199
Query: 185 AWNFVNDWLKTTLCLQYKPQYIAAGSLYLAAKFQNVKLPVHGGHVWWHQFDVAPKPLEAV 244
AWNFVND L+T+LCLQ+KP +IAAG+++LAAKF VKLP G VWW +FDV P+ LE V
Sbjct: 200 AWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEDV 259
Query: 245 LQQMREM 251
QM E+
Sbjct: 260 SNQMLEL 266
>AT5G45190.2 | chr5:18277808-18280733 REVERSE LENGTH=591
Length = 590
Score = 295 bits (755), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 135/258 (52%), Positives = 187/258 (72%), Gaps = 11/258 (4%)
Query: 5 SQTSKLSCEHMYSWYFTREELEKFSPSRKDGITEIMESEIRQLYCSFIRDVGIRLKLP-- 62
S+ S E + WYF R+E+E+ SPSR DGI E+ +R+ YC+F++D+G+RLKL
Sbjct: 20 SRNSHEKQEEVSRWYFGRKEIEENSPSRLDGIDLKKETYLRKSYCTFLQDLGMRLKLAWF 79
Query: 63 ---------QMTIATAIMFCHRFYLYQSLAKNGWQTIATVCIFLASKVEDTPCPLDQVIR 113
+TIATAI+FCHRF+ QS AKN +TIATVC+FLA KVE+TP PL VI
Sbjct: 80 LDIIAYVCTDVTIATAIIFCHRFFFRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIF 139
Query: 114 VAYGTMYRRDPATARRIHQKDVFEKQKALILTGERLVLTTVRFDFNIQHPYRPLLDAMEK 173
V+Y + ++DP +++I QK+V+E+QK LIL GE++VL+T+ FD N+ HPY+PL++A++K
Sbjct: 140 VSYEIINKKDPGASQKIKQKEVYEQQKELILNGEKIVLSTLGFDLNVYHPYKPLVEAIKK 199
Query: 174 LGISQKEVKQVAWNFVNDWLKTTLCLQYKPQYIAAGSLYLAAKFQNVKLPVHGGHVWWHQ 233
++Q + QVAWNFVND L+T+LCLQ+KP +IAAG+++LAAKF VKLP G VWW +
Sbjct: 200 FKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQE 259
Query: 234 FDVAPKPLEAVLQQMREM 251
FDV P+ LE V QM E+
Sbjct: 260 FDVTPRQLEDVSNQMLEL 277
>AT1G27630.1 | chr1:9611647-9613967 FORWARD LENGTH=318
Length = 317
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 113/235 (48%), Positives = 163/235 (69%), Gaps = 3/235 (1%)
Query: 18 WYFTREELEKFSPSRKDGITEIMESEIRQLYCSFIRDVGIRLKLPQMTIATAIMFCHRFY 77
WYF+REE+E+FSPSRKDGI + ES +R YC+F++ +G++L + Q+TI+ A++ CHRFY
Sbjct: 34 WYFSREEIERFSPSRKDGIDLVKESFLRSSYCTFLQRLGMKLHVSQVTISCAMVMCHRFY 93
Query: 78 LYQSLAKNGWQTIATVCIFLASKVEDTPCPLDQVIRVAYGTMYRRDPATARRIHQKDVFE 137
+ QS AKN WQTIAT +FLA K ED PC L V+ +Y +Y DP+ + RIHQ + +
Sbjct: 94 MRQSHAKNDWQTIATSSLFLACKAEDEPCQLSSVVVASYEIIYEWDPSASIRIHQTECYH 153
Query: 138 KQKALILTGERLVLTTVRFDFNIQHPYRPLLDAMEKLGISQKEVKQVAWNFVNDWLKTTL 197
+ K +IL+GE L+L+T F +I+ PY+PL A+ +L + ++ AWNFV+DW++TTL
Sbjct: 154 EFKEIILSGESLLLSTSAFHLDIELPYKPLAAALNRLN-AWPDLATAAWNFVHDWIRTTL 212
Query: 198 CLQYKPQYIAAGSLYLAAKFQNVKLPVHGGHVWWHQFDVAPKPLEAVLQQMREMV 252
CLQYKP IA +++LAA FQN K V WW +F V K L+ V+Q+M ++
Sbjct: 213 CLQYKPHVIATATVHLAATFQNAK--VGSRRDWWLEFGVTTKLLKEVIQEMCTLI 265
>AT4G19560.1 | chr4:10661904-10664369 FORWARD LENGTH=461
Length = 460
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 123/252 (48%), Positives = 176/252 (69%), Gaps = 6/252 (2%)
Query: 2 DGESQTSKLSCEHMYSWYFTREELEKFSPSRKDGITEIMESEIRQLYCSFIRDVGIRLKL 61
D S S L + + W+F+REE+E+ SPSR+DGI E+ +R YC+F+ +G RLK+
Sbjct: 15 DASSVASNLHDDEIIPWFFSREEIERNSPSRRDGIDLKTETRLRDSYCTFLEILGERLKV 74
Query: 62 PQMTIATAIMFCHRFYLYQSLAKNGWQTIATVCIFLASKVEDTPCPLDQVIRVAYGTMYR 121
PQ+TIATAI FCHRF+L QS AKN QTIATVC+ LA KVE+TP L+ VI +Y +++
Sbjct: 75 PQVTIATAIFFCHRFFLRQSHAKNDRQTIATVCMLLAGKVEETPVTLEDVIIASYERIHK 134
Query: 122 RDPATARRIHQKDVFEKQKALILTGERLVLTTVRFDFNIQHPYRPLLDAMEKLGI--SQK 179
+D A A+R K+V+++QK L+L GE LVL+T+ FD I HPY+PL++A++K + ++
Sbjct: 135 KDLAGAQR---KEVYDQQKELVLIGEELVLSTLNFDLCISHPYKPLVEAIKKYMVEDAKT 191
Query: 180 EVKQVAWNFVNDWLKTTLCLQYKPQYIAAGSLYLAAKFQNVKLPVHGGHVWWHQFDVAPK 239
++ Q AWNFVND L+TTLCLQY+P +IAAG++ LAA+ V L + V +FD+ P
Sbjct: 192 QLAQFAWNFVNDCLRTTLCLQYQPHHIAAGAILLAAELPTVDLQSY-REVLCQEFDITPC 250
Query: 240 PLEAVLQQMREM 251
LE + Q+ E+
Sbjct: 251 QLEDIRGQILEL 262
>AT1G35440.1 | chr1:13035294-13036037 REVERSE LENGTH=248
Length = 247
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 99/237 (41%), Positives = 151/237 (63%), Gaps = 9/237 (3%)
Query: 17 SWYFTREELEKFSPSRKDGITEIMESEIRQLYCSFIRDVGIRLKLPQMTIATAIMFCHRF 76
+WY TRE +EK SPSR DGI E+ R Y SF++++G RL PQ TIATAI+ C RF
Sbjct: 6 NWYNTREAIEKTSPSRLDGINLKEETFQRWSYTSFLQELGQRLNNPQKTIATAIVLCQRF 65
Query: 77 YLYQSLAKNGWQTIATVCIFLASKVEDTPCPLDQVIRVAYGTMYRRDPATARRIHQKDVF 136
+ QSL KN +T+A +C+F+A KVE +P P V+ V+Y ++ ++P +DVF
Sbjct: 66 FTRQSLTKNDPKTVAIICMFIAGKVEGSPRPAGDVVFVSYRVLFNKEPL-------RDVF 118
Query: 137 EKQKALILTGERLVLTTVRFDFNIQHPYRPLLDAMEKLGISQ--KEVKQVAWNFVNDWLK 194
E+ K +LTGE+LVL+T+ D I+HPY+ ++D +++ ++ + + Q A+NFVND L+
Sbjct: 119 ERLKMTVLTGEKLVLSTLECDLEIEHPYKLVMDWVKRSVKTEDGRRLCQAAFNFVNDSLR 178
Query: 195 TTLCLQYKPQYIAAGSLYLAAKFQNVKLPVHGGHVWWHQFDVAPKPLEAVLQQMREM 251
T+LCLQ+ P IA+ ++Y+ + LP G WW +FDV + L + QM ++
Sbjct: 179 TSLCLQFGPSQIASAAIYIGLSMCKMTLPCDGDKAWWREFDVTKRQLWEICDQMLDL 235
>AT2G26430.1 | chr2:11243433-11245504 REVERSE LENGTH=417
Length = 416
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/240 (35%), Positives = 134/240 (55%), Gaps = 10/240 (4%)
Query: 17 SWYFTREELEKFSPSRKDGITEIMESEIRQLYCSFIRDVGIRLKLPQMTIATAIMFCHRF 76
++Y + E+L K SPSRKDGI E E +R C I++ GI LKLPQ +AT + RF
Sbjct: 8 NFYLSDEQL-KASPSRKDGIDETTEISLRIYGCDLIQEGGILLKLPQAVMATGQVLFQRF 66
Query: 77 YLYQSLAKNGWQTIATVCIFLASKVEDTPCPLDQVIRVAYGTMYRRD--PATARRIHQKD 134
Y +SLAK + +A C++LASK+E+ P QVI V + RR+ P ++ K
Sbjct: 67 YCKKSLAKFDVKIVAASCVWLASKLEENPKKARQVIIVFHRMECRRENLPLEHLDMYAKK 126
Query: 135 VFEKQKALILTGERLVLTTVRFDFNIQHPYRPLLDAMEKLGISQKEVKQVAWNFVNDWLK 194
F + K + ER +L + F +++HP++ + + + L + E++Q AWN ND L+
Sbjct: 127 -FSELKVELSRTERHILKEMGFVCHVEHPHKFISNYLATLE-TPPELRQEAWNLANDSLR 184
Query: 195 TTLCLQYKPQYIAAGSLYLAAKFQNVKLPVHGGHVWWHQFDVAPKPLEAVLQQMREMVHM 254
TTLC++++ + +A G +Y AA+ V LP + WW FD ++ V R + H+
Sbjct: 185 TTLCVRFRSEVVACGVVYAAARRFQVPLPENP--PWWKAFDADKSSIDEVC---RVLAHL 239
>AT5G48640.1 | chr5:19723653-19725641 REVERSE LENGTH=254
Length = 253
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 52 IRDVGIRLKLPQMTIATAIMFCHRFYLYQSLAKNGWQTIATVCIFLASKVEDTPCPLDQV 111
I + +K+ Q +ATAI + R Y+ +S+ + + +A C++LASK E++ +
Sbjct: 48 IMKLAQHIKVRQRVVATAITYMRRVYIRKSMVEFEPRLVALTCLYLASKAEESIVQARNL 107
Query: 112 IRVAYGTMYRRDPATARRIHQKDVFEKQKALILTGERLVLTTVRFDFNIQHPYRPLLDAM 171
+ + R P + KD IL E VL + + + HPYR L + +
Sbjct: 108 V----FYIKRLYPDEYNKYELKD--------ILGMEMKVLEALDYYLVVFHPYRSLSEFL 155
Query: 172 EKLGISQKEVKQVAWNFVNDWLKTTLCLQYKPQYIAAGSLYLAA 215
+ ++ + Q+ W VND K L L + P IA +Y+A+
Sbjct: 156 QDAALNDVNMNQITWGIVNDTYKMDLILVHPPYRIALACIYIAS 199
>AT5G48630.2 | chr5:19721663-19723119 REVERSE LENGTH=257
Length = 256
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 12/166 (7%)
Query: 50 SFIRDVGIRLKLPQMTIATAIMFCHRFYLYQSLAKNGWQTIATVCIFLASKVEDTPCPLD 109
++I + +K+ Q +ATA+ + R Y +SL + + +A C++LA K E++
Sbjct: 49 NYISKLAQHIKIRQRVVATAVTYMRRVYTRKSLTEYEPRLVAPTCLYLACKAEES----- 103
Query: 110 QVIRVAYGTMYRRDPATARRIHQKDVFEKQKALILTGERLVLTTVRFDFNIQHPYRPLLD 169
V+ Y ++++ + F + IL E VL + F + HPYR L +
Sbjct: 104 -VVHAKLLVFY------MKKLYADEKFRYEIKDILEMEMKVLEALNFYLVVFHPYRSLPE 156
Query: 170 AMEKLGISQKEVKQVAWNFVNDWLKTTLCLQYKPQYIAAGSLYLAA 215
++ GI+ + + W VND + L L + P I +Y+A+
Sbjct: 157 FLQDSGINDTSMTHLTWGLVNDTYRMDLILIHPPFLITLACIYIAS 202
>AT1G20610.1 | chr1:7135073-7137273 REVERSE LENGTH=430
Length = 429
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 91/201 (45%), Gaps = 22/201 (10%)
Query: 15 MYSWYFTREELEKFSPSRKDGITEIMESEIRQLYCSFIRDVGIRLKLPQMTIATAIMFCH 74
M+++Y E+L P+ D ++ E +R + ++ +V + +L + T+ I
Sbjct: 181 MHTFYKNFEKLSCVPPNYMDNQQDLNE-RMRGILIDWLIEVHYKFELMEETLYLTINVID 239
Query: 75 RFYLYQSLAKNGWQTIATVCIFLASKVEDTPCPL-DQVIRVAYGTMYRRDPATARRIHQK 133
RF + + Q + + LA K E+ P+ D +I ++ D A +RR
Sbjct: 240 RFLAVHQIVRKKLQLVGVTALLLACKYEEVSVPVVDDLILIS-------DKAYSRR---- 288
Query: 134 DVFEKQKALILTGERLVLTTVRFDFNIQHPYRPLLDAMEKLGISQKEVKQVAWNFVNDWL 193
+L E+L+ T++F+F++ PY + K S K+++ +++ + L
Sbjct: 289 --------EVLDMEKLMANTLQFNFSLPTPY-VFMKRFLKAAQSDKKLEILSFFMIELCL 339
Query: 194 KTTLCLQYKPQYIAAGSLYLA 214
L+Y P +AA ++Y A
Sbjct: 340 VEYEMLEYLPSKLAASAIYTA 360
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.132 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,162,597
Number of extensions: 543312
Number of successful extensions: 1249
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 1240
Number of HSP's successfully gapped: 9
Length of query: 630
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 525
Effective length of database: 8,227,889
Effective search space: 4319641725
Effective search space used: 4319641725
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 115 (48.9 bits)