Os02g0330700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0330700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 90.81 | 0.448 | 9.42 | -0.854 | 0.664 | -2.64 | -0.418 | -0.895 | -0.278 | 16.8 | 29.52 | 31 | -- | -- |
| 91.78 | 0.446 | 9.43 | -0.99 | 0.668 | -2.6 | -0.192 | -- | -0.309 | 16.8 | 29.65 | 31 | -- | -- |
| 91.19 | 0.445 | 9.43 | -0.886 | 0.67 | -2.63 | -- | -0.675 | -0.287 | 16.8 | 29.5 | 31 | -- | -- |
| 91.81 | 0.446 | 9.44 | -1 | 0.676 | -2.62 | -- | -- | -0.316 | 16.8 | 29.6 | 31 | -- | -- |
| 109.57 | 0.488 | 9.47 | -1.01 | -- | -3.03 | -- | -0.0725 | -0.415 | -- | 30.2 | 66 | -- | -- |
| 184.99 | 0.638 | 9.32 | -0.369 | 1.48 | -- | 0.259 | -- | 0.212 | 15.4 | -- | -- | -- | -- |
| 185.2 | 0.637 | 9.32 | -0.365 | 1.48 | -- | -- | -- | 0.214 | 15.4 | -- | -- | -- | -- |
| 106.63 | 0.481 | 9.46 | -1.18 | -- | -3.23 | -- | -- | -0.437 | -- | 29.69 | 113 | -- | -- |
| 114.89 | 0.502 | 9.4 | -- | 0.826 | -2.2 | -- | -- | -0.119 | 16.6 | 29.82 | 32 | -- | -- |
| 307.46 | 0.819 | 9.32 | -0.427 | -- | -- | -- | -- | 0.175 | -- | -- | -- | -- | -- |
| 188.7 | 0.643 | 9.31 | -- | 1.48 | -- | -- | -- | 0.254 | 15.4 | -- | -- | -- | -- |
| 140.9 | 0.553 | 9.42 | -- | -- | -2.88 | -- | -- | -0.231 | -- | 30.07 | 109 | -- | -- |
| 312.27 | 0.825 | 9.31 | -- | -- | -- | -- | -- | 0.222 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 89.85 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 3 | 90.09 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 6 | 90.60 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 7 | 90.92 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 8 | 90.99 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 10 | 91.07 | temperature | 30 | 30 | < th | dose dependent | no | NA | NA |
| 12 | 91.22 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 21 | 92.90 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 23 | 93.73 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 24 | 93.83 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 26 | 94.98 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 27 | 95.11 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 28 | 95.22 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 36 | 96.20 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 38 | 96.28 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 128 | 102.68 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 131 | 102.71 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 152 | 103.85 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 163 | 104.31 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 214 | 106.20 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 17 |
| 228 | 106.58 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 236 | 106.90 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 242 | 107.10 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 344 | 109.47 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 439 | 111.40 | temperature | 25 | 720 | < th | dose dependent | sin | 23 | NA |
| 448 | 111.62 | temperature | 30 | 90 | < th | dose dependent | sin | 5 | NA |
| 491 | 112.34 | temperature | 25 | 90 | < th | dose dependent | sin | 23 | NA |
| 506 | 112.56 | temperature | 10 | 90 | > th | dose dependent | sin | 6 | NA |
| 662 | 114.60 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 818 | 116.09 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 961 | 117.24 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |